RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 OR51M1Q9H341 326 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 MS4A5Q9H3V2 200 aa11.76□□□□□ -0.53
VCP-201ENST00000358901 CHCHD2Q9Y6H1 151 aaPredicted RBP11.76□□□□□ -0.53
VCP-201ENST00000358901 WNK3Q9BYP7 1800 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 ODAMA1E959 279 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 IGFBP3P17936 291 aaPredicted RBP11.75□□□□□ -0.53
VCP-201ENST00000358901 NFAM1Q8NET5 270 aaPredicted RBP11.75□□□□□ -0.53
VCP-201ENST00000358901 ZNF837Q96EG3 531 aaPredicted RBP11.75□□□□□ -0.53
VCP-201ENST00000358901 P2RX4Q99571 388 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 IL36RNQ9UBH0 155 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 COL6A6A6NMZ7 2263 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 MARCH11A6NNE9 402 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 C16orf97H3BN30 126 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 PRSS1P07477 247 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 ACP1P24666 158 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 LY6G6FQ5SQ64 297 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 ZNF385CQ66K41 422 aaPredicted RBP11.75□□□□□ -0.53
VCP-201ENST00000358901 CALHM1Q8IU99 346 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 ITLN1Q8WWA0 313 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 SHANK1Q9Y566 2161 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 DIRC3C9JPN6 131 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 NKX2-8O15522 239 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 S1PR2O95136 353 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 PLAUP00749 431 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 APCSP02743 223 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 WDFY1Q8IWB7 410 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 GALNT14Q96FL9 552 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 SLC25A10Q9UBX3 287 aaPredicted RBP11.75□□□□□ -0.53
VCP-201ENST00000358901 MPDZO75970 2070 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 PATJQ8NI35 1801 aa11.75□□□□□ -0.53
VCP-201ENST00000358901 FAM90A26D6RGX4 464 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 K7N7A8 449 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 EGR1P18146 543 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 BRS3P32247 399 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 SAXO1Q8IYX7 474 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 DRAM1Q8N682 238 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 FLVCR1-AS1Q8TAF5 88 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 PAXXQ9BUH6 204 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 OPN3Q9H1Y3 402 aaPredicted RBP11.74□□□□□ -0.53
VCP-201ENST00000358901 NAGKQ9UJ70 344 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 TMSB15BA0A087X1C1 80 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 TRGC1P0CF51 173 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 CDX1P47902 265 aaPredicted RBP11.74□□□□□ -0.53
VCP-201ENST00000358901 P2RY6Q15077 328 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 TMEM54Q969K7 222 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 GFI1Q99684 422 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 PILRBQ9UKJ0 227 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 CARHSP1Q9Y2V2 147 aaKnown RBP11.74□□□□□ -0.53
VCP-201ENST00000358901 CACNA1BQ00975 2339 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 TRBV23-1A0A0A0MS06 115 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 CXorf65A6NEN9 183 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 GLIPR1P48060 266 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 STARD6P59095 220 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 OR1P1Q8NH06 330 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 KLF14Q8TD94 323 aaPredicted RBP11.74□□□□□ -0.53
VCP-201ENST00000358901 IGHV3-72A0A0B4J1Y9 119 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 LINC00869P0C866 280 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 HIST1H1BP16401 226 aaKnown RBP11.74□□□□□ -0.53
VCP-201ENST00000358901 SUCLG1P53597 346 aaKnown RBP11.74□□□□□ -0.53
VCP-201ENST00000358901 ZNF658BQ4V348 819 aaPredicted RBP11.74□□□□□ -0.53
VCP-201ENST00000358901 OR8G5Q8NG78 346 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 TMUB1Q9BVT8 246 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 TM2D1Q9BX74 207 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 RAB1BQ9H0U4 201 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 PARLQ9H300 379 aa11.74□□□□□ -0.53
VCP-201ENST00000358901 DOCK7Q96N67 2140 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 RALGAPA2Q2PPJ7 1873 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 PPIAL4EA0A075B759 164 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 PPIAL4DF5H284 164 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 PPIAL4FP0DN26 164 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 COX5BP10606 129 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 MMDQ15546 238 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 PPIAL4AQ9Y536 164 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 ISLRO14498 428 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 SHISA5Q8N114 240 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 TXNDC17Q9BRA2 123 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 PCNX1Q96RV3 2341 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 hCG_38984A0A1B0GV85 526 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 M0QZK8 103 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 GGCTO75223 188 aaKnown RBP11.73□□□□□ -0.53
VCP-201ENST00000358901 AGAP20933 346 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 KCNMB1Q16558 191 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 VWA1Q6PCB0 445 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 PPP1R32Q7Z5V6 425 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 ABHD12Q8N2K0 398 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 LEAP2Q969E1 77 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 RCC1LQ96I51 464 aaKnown RBP11.73□□□□□ -0.53
VCP-201ENST00000358901 ELOVL1Q9BW60 279 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 KIAA2026Q5HYC2 2103 aa11.73□□□□□ -0.53
VCP-201ENST00000358901 LOC105371267A0A1B0GV96 52 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 M0QZ24 198 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 NPIPB7O75200 414 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 ORM1P02763 201 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 RNF126Q9BV68 326 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 TMEM140Q9NV12 185 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 UFC1Q9Y3C8 167 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 ANK1P16157 1881 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 PSME4Q14997 1843 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 CEACAM18A8MTB9 384 aa11.72□□□□□ -0.53
VCP-201ENST00000358901 F5H697 171 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms