RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 MOB3BQ86TA1 216 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 TRGV8A0A0C4DH27 118 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 KIR2DL1P43626 348 aaPredicted RBP7.63□□□□□ -1.19
COL6A6-201ENST00000358511 KIR2DL2P43627 348 aaPredicted RBP7.63□□□□□ -1.19
COL6A6-201ENST00000358511 MGAT2Q10469 447 aa7.63□□□□□ -1.19
COL6A6-201ENST00000358511 OTX1P32242 354 aaPredicted RBP7.62□□□□□ -1.19
COL6A6-201ENST00000358511 COPS9Q8WXC6 57 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 COX14Q96I36 57 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 MRPL16Q9NX20 251 aaKnown RBP7.62□□□□□ -1.19
COL6A6-201ENST00000358511 A1L4Q6 167 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 SLC25A17O43808 307 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 GALNSP34059 522 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 WFDC8Q8IUA0 241 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 MMD2Q8IY49 270 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 KISS1RQ969F8 398 aaPredicted RBP7.62□□□□□ -1.19
COL6A6-201ENST00000358511 ABHD14AQ9BUJ0 271 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 PCDH15Q96QU1 1955 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 TRAV9-1A0A075B6T8 112 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 C1orf100Q5SVJ3 147 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 C6orf15Q6UXA7 325 aaPredicted RBP7.62□□□□□ -1.19
COL6A6-201ENST00000358511 F11RQ9Y624 299 aaKnown RBP7.62□□□□□ -1.19
COL6A6-201ENST00000358511 IGHV3-43A0A0B4J1X8 118 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 CDK2AP2O75956 126 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 IL4P05112 153 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 IGHV3-43DP0DP04 118 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 CKS2P33552 79 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 RELBQ01201 579 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 C14orf144Q96I85 54 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 WNT10AQ9GZT5 417 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 LAMTOR2Q9Y2Q5 125 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 ZNF205O95201 554 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 ZPBPQ9BS86 351 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 PRRG2O14669 202 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 SYNGR1O43759 233 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 S1PR2O95136 353 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 ZNF708P17019 499 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 MAS1LP35410 378 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 NUTF2P61970 127 aaKnown RBP7.62□□□□□ -1.19
COL6A6-201ENST00000358511 NFAM1Q8NET5 270 aaPredicted RBP7.62□□□□□ -1.19
COL6A6-201ENST00000358511 NLRC5Q86WI3 1866 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 C19orf54Q5BKX5 351 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 LMO7DNF2Z398 122 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 GCM2O75603 506 aaPredicted RBP7.62□□□□□ -1.19
COL6A6-201ENST00000358511 FBLN7Q53RD9 439 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 LDLRAD2Q5SZI1 272 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 C1QL3Q5VWW1 255 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 UNQ9370/PRO34162Q6UXP9 181 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 ZNF502Q8TBZ5 544 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 JKAMPQ9P055 326 aa7.62□□□□□ -1.19
COL6A6-201ENST00000358511 COL6A6A6NMZ7 2263 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 hADV38S2A0JD32 116 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 MEX3AA1L020 520 aaKnown RBP7.61□□□□□ -1.19
COL6A6-201ENST00000358511 H7C2G1 150 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 NUBP1P53384 320 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 ARF6P62330 175 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 CST9Q5W186 159 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 ZNF788Q6ZQV5 615 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 COL11A2P13942 1736 aaPredicted RBP7.61□□□□□ -1.19
COL6A6-201ENST00000358511 RAMP1O60894 148 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 PRNTQ86SH4 94 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 STARD6P59095 220 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 TMEM177Q53S58 311 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 MRPL52Q86TS9 123 aaKnown RBP7.61□□□□□ -1.19
COL6A6-201ENST00000358511 SPSB4Q96A44 273 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 TRAV38-1A0A0B4J264 116 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 C19orf67A6NJJ6 358 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 PRSS27Q9BQR3 290 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 IGKV3-7A0A075B6H7 116 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 CA1P00915 261 aaPredicted RBP7.61□□□□□ -1.19
COL6A6-201ENST00000358511 AMMECR1Q9Y4X0 333 aaPredicted RBP7.61□□□□□ -1.19
COL6A6-201ENST00000358511 J3KRW8 73 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 BGLAPP02818 100 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 ASAH2BP0C7U1 165 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 RAC3P60763 192 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 HBBP68871 147 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 COL10A1Q03692 680 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 HIST1H2BLQ99880 126 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 FOXQ1Q9C009 403 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 P2RY6Q15077 328 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 OR8B2Q96RD0 313 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 COA4Q9NYJ1 87 aa7.61□□□□□ -1.19
COL6A6-201ENST00000358511 HEPN1Q6WQI6 88 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 CYP2G1PQ6ZSU1 146 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 RCC1LQ96I51 464 aaKnown RBP7.6□□□□□ -1.19
COL6A6-201ENST00000358511 OR51B2Q9Y5P1 312 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 LINC00869P0C866 280 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 BTCP35070 178 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 SMAD4Q13485 552 aaKnown RBP7.6□□□□□ -1.19
COL6A6-201ENST00000358511 MBD1Q9UIS9 605 aaPredicted RBP7.6□□□□□ -1.19
COL6A6-201ENST00000358511 UPK3AO75631 287 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 HOXC4P09017 264 aaPredicted RBP7.6□□□□□ -1.19
COL6A6-201ENST00000358511 PRRX1P54821 245 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 ZNF645Q8N7E2 425 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 WDYHV1Q96HA8 205 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 TMEM101Q96IK0 257 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 ZNF414Q96IQ9 312 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 C2orf88Q9BSF0 95 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 LRRC61Q9BV99 259 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 OR2I1PQ8NGU4 316 aa7.6□□□□□ -1.19
COL6A6-201ENST00000358511 CLDND2Q8NHS1 167 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms