RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 SPAARA0A1B0GVQ0 90 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 NPIPB9F8W1W9 429 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 SCTP09683 121 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 ZNF735P0CB33 412 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 VWA1Q6PCB0 445 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 DHRS11Q6UWP2 260 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 STPG3Q8N7X2 389 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 ZNF488Q96MN9 340 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 MS4A7Q9GZW8 240 aaPredicted RBP10.11□□□□□ -0.79
COL9A1-202ENST00000357250 CD99P14209 185 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 RBPMS2Q6ZRY4 209 aaKnown RBP10.11□□□□□ -0.79
COL9A1-202ENST00000357250 C16orf82Q7Z2V1 217 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 FGFRL1Q8N441 504 aa10.11□□□□□ -0.79
COL9A1-202ENST00000357250 PSMG3Q9BT73 122 aaPredicted RBP10.11□□□□□ -0.79
COL9A1-202ENST00000357250 TRAV30A0A087WSZ9 112 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 A0A1W2PP11 408 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 IGLV3-19P01714 112 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 SELENOHQ8IZQ5 122 aaKnown RBP10.1□□□□□ -0.79
COL9A1-202ENST00000357250 FAM222BQ8WU58 562 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 ZNF430Q9H8G1 570 aaPredicted RBP10.1□□□□□ -0.79
COL9A1-202ENST00000357250 CBY3A6NI87 242 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 ZNHIT1O43257 154 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 ZNF883P0CG24 379 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 STPG1Q5TH74 334 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 C5orf66Q9H5L9 145 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 CISD1Q9NZ45 108 aaKnown RBP10.1□□□□□ -0.79
COL9A1-202ENST00000357250 PATJQ8NI35 1801 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 ZNF98A6NK75 572 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 GDF9O60383 454 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 MYOZ3Q8TDC0 251 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 GPR146Q96CH1 333 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 IDI2-AS1Q9NZ38 188 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 ZNF646O15015 1829 aaPredicted RBP10.1□□□□□ -0.79
COL9A1-202ENST00000357250 ZNF729A6NN14 1252 aaPredicted RBP10.1□□□□□ -0.79
COL9A1-202ENST00000357250 RAB9AP51151 201 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 NHLRC3Q5JS37 347 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 ATG101Q9BSB4 218 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 WNT5BQ9H1J7 359 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 RBKSQ9H477 322 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 CALYQ9NYX4 217 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 ZNF236Q9UL36 1845 aa10.1□□□□□ -0.79
COL9A1-202ENST00000357250 IGHV3OR15-7A0A075B7D8 119 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 GCGP01275 180 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 CSN3P07498 182 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 PUSL1Q8N0Z8 303 aaKnown RBP10.09□□□□□ -0.79
COL9A1-202ENST00000357250 COL25A1Q9BXS0 654 aaPredicted RBP10.09□□□□□ -0.79
COL9A1-202ENST00000357250 AICDAQ9GZX7 198 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 A0A1W2PS18 150 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 CCL21O00585 134 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 CRYBA2P53672 197 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 RPS20P60866 119 aaKnown RBP10.09□□□□□ -0.79
COL9A1-202ENST00000357250 RUNX1Q01196 453 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 TNFRSF9Q07011 255 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 BPIFA4PQ86YQ2 179 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 LRRC75AQ8NAA5 344 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 PI4KAP42356 2102 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 MGAMO43451 1857 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 FTH1P19P0C7X4 201 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 DANCRP0C864 163 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 MFAP2P55001 183 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 CLDN18P56856 261 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 EGR4Q05215 589 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 OR2D3Q8NGH3 330 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 ITLN1Q8WWA0 313 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 LINC00869P0C866 280 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 ID4P47928 161 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 OR4A5Q8NH83 315 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 CCL13Q99616 98 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 TM2D1Q9BX74 207 aa10.09□□□□□ -0.79
COL9A1-202ENST00000357250 IGKV3D-11A0A0A0MRZ8 115 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.08□□□□□ -0.8
COL9A1-202ENST00000357250 TRAV34A0A0B4J273 112 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 TBX6O95947 436 aaPredicted RBP10.08□□□□□ -0.8
COL9A1-202ENST00000357250 FAM106CPP0CH98 169 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 TMEM187Q14656 261 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 SLC35E4Q6ICL7 350 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 POC1AQ8NBT0 407 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 TMEM186Q96B77 213 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 RBM14Q96PK6 669 aaKnown RBP10.08□□□□□ -0.8
COL9A1-202ENST00000357250 ZNF552Q9H707 407 aaPredicted RBP10.08□□□□□ -0.8
COL9A1-202ENST00000357250 ZFP30Q9Y2G7 519 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 LRRC37A2A6NM11 1700 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 CENPFP49454 3210 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 CIDEAO60543 219 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 KLF7O75840 302 aaPredicted RBP10.08□□□□□ -0.8
COL9A1-202ENST00000357250 MRPL32Q9BYC8 188 aaKnown RBP10.08□□□□□ -0.8
COL9A1-202ENST00000357250 AKIRIN1Q9H9L7 192 aaPredicted RBP10.08□□□□□ -0.8
COL9A1-202ENST00000357250 COL4A6Q14031 1691 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 A0A1W2PQM1 296 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 TMEM250H0YL14 139 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 AREGP15514 252 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 CCL8P80075 99 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 HOXA4Q00056 320 aaPredicted RBP10.08□□□□□ -0.8
COL9A1-202ENST00000357250 PMCHL1Q16048 86 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 SNAI3Q3KNW1 292 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 CXorf66Q5JRM2 361 aaPredicted RBP10.08□□□□□ -0.8
COL9A1-202ENST00000357250 SCGB1D4Q6XE38 83 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 OR4C12Q96R67 309 aa10.08□□□□□ -0.8
COL9A1-202ENST00000357250 RSG1Q9BU20 258 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms