RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 WFIKKN1Q96NZ8 548 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 QTRT1Q9BXR0 403 aaKnown RBP13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 UQCR10Q9UDW1 63 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 SIAH2O43255 324 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 ZNF735P0CB33 412 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 ACP1P24666 158 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 HS3ST3B1Q9Y662 390 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 RALGAPA1Q6GYQ0 2036 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 A6NDN8 102 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 UCP2P55851 309 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 SRSF3P84103 164 aaKnown RBP13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 TTTY12Q9BZ98 90 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 SAP30LQ9HAJ7 183 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 WNK3Q9BYP7 1800 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 RALGAPA2Q2PPJ7 1873 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 PLXNA1Q9UIW2 1896 aa13.39□□□□□ -0.27
TRAPPC11-202ENST00000357207 IGHV1-45A0A0A0MS14 117 aa13.38□□□□□ -0.27
TRAPPC11-202ENST00000357207 MPV17P39210 176 aa13.38□□□□□ -0.27
TRAPPC11-202ENST00000357207 PMCHL1Q16048 86 aa13.38□□□□□ -0.27
TRAPPC11-202ENST00000357207 RND1Q92730 232 aa13.38□□□□□ -0.27
TRAPPC11-202ENST00000357207 FBLN5Q9UBX5 448 aa13.38□□□□□ -0.27
TRAPPC11-202ENST00000357207 UCP1P25874 307 aa13.38□□□□□ -0.27
TRAPPC11-202ENST00000357207 Q1RN00 199 aa13.38□□□□□ -0.27
TRAPPC11-202ENST00000357207 SPATA45Q537H7 98 aa13.38□□□□□ -0.27
TRAPPC11-202ENST00000357207 IGHV3OR15-7A0A075B7D8 119 aa13.38□□□□□ -0.27
TRAPPC11-202ENST00000357207 SNRPCP09234 159 aaKnown RBP13.38□□□□□ -0.27
TRAPPC11-202ENST00000357207 ZNF826PQ6ZT77 177 aa13.38□□□□□ -0.27
TRAPPC11-202ENST00000357207 GNG7O60262 68 aa13.38□□□□□ -0.27
TRAPPC11-202ENST00000357207 HINT1P49773 126 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC11-202ENST00000357207 CHRNA10Q9GZZ6 450 aa13.38□□□□□ -0.27
TRAPPC11-202ENST00000357207 PATJQ8NI35 1801 aa13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 RSPO4Q2I0M5 234 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 ABCA7Q8IZY2 2146 aa13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 RASL11BQ9BPW5 248 aa13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 ROS1P08922 2347 aa13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 OR2T8A6NH00 312 aa13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 MARCH11A6NNE9 402 aa13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 EGR1P18146 543 aa13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 CEACAM3P40198 252 aa13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 CYP2G1PQ6ZSU1 146 aa13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 DEFB123Q8N688 67 aa13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 TMEM116Q8NCL8 245 aa13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 IER2Q9BTL4 223 aa13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 MTCL1Q9Y4B5 1905 aaKnown RBP13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 LOC102724200A0A096LPH7 203 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 PATE3B3GLJ2 98 aa13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 SPSB2Q99619 263 aa13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 AMMECR1Q9Y4X0 333 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC11-202ENST00000357207 A0A087WWC5 75 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 IGKV3D-11A0A0A0MRZ8 115 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 GRIFINA4D1Z8 144 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 VENTXO95231 258 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 KIAA1644Q3SXP7 199 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 DRAM1Q8N682 238 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 OR8A1Q8NGG7 326 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 ASCL3Q9NQ33 180 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 DOCK4Q8N1I0 1966 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 FAM157AC9JC47 383 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 S1PR2O95136 353 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 ARL14EPLP0DKL9 152 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 COX5BP10606 129 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 SELENOTP62341 195 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 KCNMB1Q16558 191 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 C1orf210Q8IVY1 113 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 LINC00869P0C866 280 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 SPSB4Q96A44 273 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 INSIG2Q9Y5U4 225 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 KLK10O43240 276 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 FGF5P12034 268 aa13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 RPL31P62899 125 aaKnown RBP13.36□□□□□ -0.27
TRAPPC11-202ENST00000357207 B4E171 279 aa13.35□□□□□ -0.27
TRAPPC11-202ENST00000357207 TSPAN7P41732 249 aa13.35□□□□□ -0.27
TRAPPC11-202ENST00000357207 TMEM54Q969K7 222 aa13.35□□□□□ -0.27
TRAPPC11-202ENST00000357207 SRXN1Q9BYN0 137 aa13.35□□□□□ -0.27
TRAPPC11-202ENST00000357207 CLEC1BQ9P126 229 aa13.35□□□□□ -0.27
TRAPPC11-202ENST00000357207 HSPE1P61604 102 aaKnown RBP13.35□□□□□ -0.27
TRAPPC11-202ENST00000357207 PLSCR2Q9NRY7 297 aa13.35□□□□□ -0.27
TRAPPC11-202ENST00000357207 HYPMO75409 117 aa13.35□□□□□ -0.27
TRAPPC11-202ENST00000357207 SOD3P08294 240 aa13.35□□□□□ -0.27
TRAPPC11-202ENST00000357207 ZNF658BQ4V348 819 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC11-202ENST00000357207 MMD2Q8IY49 270 aa13.35□□□□□ -0.27
TRAPPC11-202ENST00000357207 LINC00469Q8N7U9 141 aa13.35□□□□□ -0.27
TRAPPC11-202ENST00000357207 Q8WTZ3 238 aa13.35□□□□□ -0.27
TRAPPC11-202ENST00000357207 FAM222BQ8WU58 562 aa13.35□□□□□ -0.27
TRAPPC11-202ENST00000357207 TMEM45BQ96B21 275 aa13.35□□□□□ -0.27
TRAPPC11-202ENST00000357207 CEACAM18A8MTB9 384 aa13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 CIDEAO60543 219 aa13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 ORM1P02763 201 aa13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 SRIP30626 198 aa13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 REG1BP48304 166 aa13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 CEBPDP49716 269 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 SSX8Q7RTT4 187 aa13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 PAQR4Q8N4S7 273 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 REG4Q9BYZ8 158 aa13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 ZDHHC8Q9ULC8 765 aa13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 K7N7A8 449 aa13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 CD82P27701 267 aa13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 LCN2P80188 198 aa13.34□□□□□ -0.27
TRAPPC11-202ENST00000357207 RBM14Q96PK6 669 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms