RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ZNF585BQ52M93 769 aa14.79□□□□□ -0.04
SMARCD3-202ENST00000356800 C11orf87Q6NUJ2 197 aa14.79□□□□□ -0.04
SMARCD3-202ENST00000356800 TMEM65Q6PI78 240 aa14.79□□□□□ -0.04
SMARCD3-202ENST00000356800 KIR3DL3Q8N743 410 aa14.79□□□□□ -0.04
SMARCD3-202ENST00000356800 OR9G1Q8NH87 305 aa14.79□□□□□ -0.04
SMARCD3-202ENST00000356800 LPAR2Q9HBW0 351 aa14.79□□□□□ -0.04
SMARCD3-202ENST00000356800 HSPB11Q9Y547 144 aa14.79□□□□□ -0.04
SMARCD3-202ENST00000356800 hCG_1809904A0A1W2PP81 198 aa14.78□□□□□ -0.04
SMARCD3-202ENST00000356800 A0A1W2PPE2 198 aa14.78□□□□□ -0.04
SMARCD3-202ENST00000356800 A0A1W2PR64 198 aa14.78□□□□□ -0.04
SMARCD3-202ENST00000356800 A0A1W2PRV1 198 aa14.78□□□□□ -0.04
SMARCD3-202ENST00000356800 M0R1X1 148 aa14.78□□□□□ -0.04
SMARCD3-202ENST00000356800 DUTP33316 252 aaKnown RBP14.78□□□□□ -0.04
SMARCD3-202ENST00000356800 NMSQ5H8A3 153 aa14.78□□□□□ -0.04
SMARCD3-202ENST00000356800 C1orf122Q6ZSJ8 110 aa14.78□□□□□ -0.04
SMARCD3-202ENST00000356800 KRTAP1-3Q8IUG1 177 aa14.78□□□□□ -0.04
SMARCD3-202ENST00000356800 SIRT7Q9NRC8 400 aa14.78□□□□□ -0.04
SMARCD3-202ENST00000356800 BOLA1Q9Y3E2 137 aa14.78□□□□□ -0.04
SMARCD3-202ENST00000356800 ITPR2Q14571 2701 aa14.78□□□□□ -0.04
SMARCD3-202ENST00000356800 FXYD6-FXYD2A0A087WZ82 144 aa14.77□□□□□ -0.04
SMARCD3-202ENST00000356800 USF1P22415 310 aaPredicted RBP14.77□□□□□ -0.04
SMARCD3-202ENST00000356800 PRTN3P24158 256 aa14.77□□□□□ -0.04
SMARCD3-202ENST00000356800 LGALSLQ3ZCW2 172 aaPredicted RBP14.77□□□□□ -0.04
SMARCD3-202ENST00000356800 LRRC37A5PQ49AS3 106 aa14.77□□□□□ -0.04
SMARCD3-202ENST00000356800 Q5PR19 223 aa14.77□□□□□ -0.04
SMARCD3-202ENST00000356800 NCR3LG1Q68D85 454 aa14.77□□□□□ -0.04
SMARCD3-202ENST00000356800 HCP5Q6MZN7 132 aa14.77□□□□□ -0.04
SMARCD3-202ENST00000356800 ZBTB8BQ8NAP8 495 aaPredicted RBP14.77□□□□□ -0.04
SMARCD3-202ENST00000356800 TCTEX1D2Q8WW35 142 aa14.77□□□□□ -0.04
SMARCD3-202ENST00000356800 SIRPDQ9H106 197 aa14.77□□□□□ -0.04
SMARCD3-202ENST00000356800 PLSCR3Q9NRY6 295 aa14.77□□□□□ -0.04
SMARCD3-202ENST00000356800 GSKIPQ9P0R6 139 aa14.77□□□□□ -0.04
SMARCD3-202ENST00000356800 KPTNQ9Y664 436 aa14.77□□□□□ -0.04
SMARCD3-202ENST00000356800 HECTD1Q9ULT8 2610 aa14.77□□□□□ -0.04
SMARCD3-202ENST00000356800 IGLV1-47P01700 117 aa14.77□□□□□ -0.05
SMARCD3-202ENST00000356800 COX7A1P24310 79 aa14.77□□□□□ -0.05
SMARCD3-202ENST00000356800 OR2B11Q5JQS5 317 aa14.77□□□□□ -0.05
SMARCD3-202ENST00000356800 ZNF833PQ6ZTB9 187 aa14.77□□□□□ -0.05
SMARCD3-202ENST00000356800 THAP6Q8TBB0 222 aa14.77□□□□□ -0.05
SMARCD3-202ENST00000356800 TNFRSF14Q92956 283 aa14.77□□□□□ -0.05
SMARCD3-202ENST00000356800 SPIN2AQ99865 258 aa14.77□□□□□ -0.05
SMARCD3-202ENST00000356800 SPIN2BQ9BPZ2 258 aa14.77□□□□□ -0.05
SMARCD3-202ENST00000356800 CLEC7AQ9BXN2 247 aa14.77□□□□□ -0.05
SMARCD3-202ENST00000356800 CR1P17927 2039 aa14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 RAMP3O60896 148 aa14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 IGKV1-39P01597 117 aa14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 IGKV1D-39P04432 117 aa14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 PET100P0DJ07 73 aa14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 SLC25A6P12236 298 aa14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 LYL1P12980 280 aa14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 MMP9P14780 707 aa14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 KLRD1Q13241 179 aa14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 VMO1Q7Z5L0 202 aa14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 PNKDQ8N490 385 aa14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 OR10X1Q8NGY0 326 aa14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 CD300LFQ8TDQ1 290 aa14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 LSM10Q969L4 123 aaKnown RBP14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 ST6GALNAC6Q969X2 333 aa14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 UNKLQ9H9P5 680 aaKnown RBP14.76□□□□□ -0.05
SMARCD3-202ENST00000356800 ZNF137PP52743 207 aa14.75□□□□□ -0.05
SMARCD3-202ENST00000356800 DVL1P1P54792 670 aaPredicted RBP14.75□□□□□ -0.05
SMARCD3-202ENST00000356800 RAB32Q13637 225 aa14.75□□□□□ -0.05
SMARCD3-202ENST00000356800 DIAPH2-AS1Q14236 149 aa14.75□□□□□ -0.05
SMARCD3-202ENST00000356800 ZNF546Q86UE3 836 aa14.75□□□□□ -0.05
SMARCD3-202ENST00000356800 SPAG16Q8N0X2 631 aa14.75□□□□□ -0.05
SMARCD3-202ENST00000356800 OR4D5Q8NGN0 318 aa14.75□□□□□ -0.05
SMARCD3-202ENST00000356800 DDB2Q92466 427 aa14.75□□□□□ -0.05
SMARCD3-202ENST00000356800 RNF126Q9BV68 326 aa14.75□□□□□ -0.05
SMARCD3-202ENST00000356800 TOR1AO14656 332 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 ARPC5O15511 151 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 HLA-DRB5Q30154 266 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 PRSS54Q6PEW0 395 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 ZNF383Q8NA42 475 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 BEND2Q8NDZ0 799 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 S1PR3Q99500 378 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 ZFP57Q9NU63 452 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 MBD2Q9UBB5 411 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 TNFSF18Q9UNG2 199 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 INSIG2Q9Y5U4 225 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 A0A1B0GU03 582 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 H0YIZ8 118 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 RBFOX2O43251 390 aaKnown RBP eCLIP14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 CT45A6P0DMU7 189 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 CT45A5P0DMU8 189 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 CT45A7P0DMV0 189 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 CXCL2P19875 107 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 LPAR6P43657 344 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 PRRX1P54821 245 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 PRSS57Q6UWY2 283 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 OR11H6Q8NGC7 330 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 OR4P4Q8NGL7 312 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 OR13D1Q8NGV5 346 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 C1orf159Q96HA4 380 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 ADTRPQ96IZ2 230 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 TBX15Q96SF7 602 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 CSMD1Q96PZ7 3565 aa14.74□□□□□ -0.05
SMARCD3-202ENST00000356800 ATG12O94817 140 aa14.73□□□□□ -0.05
SMARCD3-202ENST00000356800 HOXB4P17483 251 aaPredicted RBP14.73□□□□□ -0.05
SMARCD3-202ENST00000356800 C4BPBP20851 252 aa14.73□□□□□ -0.05
SMARCD3-202ENST00000356800 KIR2DS2P43631 304 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms