RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 Q8N7P7 452 aa11.12□□□□□ -0.63
HOXA1-202ENST00000355633 TNFRSF14Q92956 283 aa11.12□□□□□ -0.63
HOXA1-202ENST00000355633 LSM10Q969L4 123 aaKnown RBP11.12□□□□□ -0.63
HOXA1-202ENST00000355633 ADTRPQ96IZ2 230 aa11.12□□□□□ -0.63
HOXA1-202ENST00000355633 CLEC7AQ9BXN2 247 aa11.12□□□□□ -0.63
HOXA1-202ENST00000355633 ARHGAP32A7KAX9 2087 aa11.12□□□□□ -0.63
HOXA1-202ENST00000355633 ARID1AO14497 2285 aa11.12□□□□□ -0.63
HOXA1-202ENST00000355633 IGHV4-61A0A0C4DH41 118 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 FCGR3BO75015 233 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 FOXH1O75593 365 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 S1PR2O95136 353 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 KIR2DS2P43631 304 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 PRRX1P54821 245 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 RAB32Q13637 225 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 ZNF833PQ6ZTB9 187 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 C9orf62Q8N4C0 152 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 KIR3DL3Q8N743 410 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 THAP6Q8TBB0 222 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 DDB2Q92466 427 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 TMEM186Q96B77 213 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 RRNAD1Q96FB5 475 aaKnown RBP11.11□□□□□ -0.63
HOXA1-202ENST00000355633 IGHV2-70DA0A0C4DH43 119 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 A0A0G2JRQ6 117 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 ATG12O94817 140 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 CRYZL1O95825 349 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 IGKV1-5P01602 117 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 SLC25A4P12235 298 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 COX7A1P24310 79 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 S100A10P60903 97 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 PRB3Q04118 309 aaPredicted RBP11.11□□□□□ -0.63
HOXA1-202ENST00000355633 FAM71F2Q6NXP2 309 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 GPR146Q96CH1 333 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 SIRT7Q9NRC8 400 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 BOLA1Q9Y3E2 137 aa11.11□□□□□ -0.63
HOXA1-202ENST00000355633 DOPEY2Q9Y3R5 2298 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 HMSDA8MTL9 139 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 RBFOX2O43251 390 aaKnown RBP eCLIP11.1□□□□□ -0.63
HOXA1-202ENST00000355633 SCGB1D2O95969 90 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 PET100P0DJ07 73 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 EPHA1P21709 976 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 IL3RAP26951 378 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 ZNF137PP52743 207 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 PAX2Q02962 417 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 CLEC12BQ2HXU8 276 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 HLA-DRB5Q30154 266 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 HIST2H2BCQ6DN03 193 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 LAMTOR1Q6IAA8 161 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 C1orf122Q6ZSJ8 110 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 FAM219AQ8IW50 185 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 ZNF383Q8NA42 475 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 OR4D5Q8NGN0 318 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 OR13D1Q8NGV5 346 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 BEX4Q9NWD9 120 aaPredicted RBP11.1□□□□□ -0.63
HOXA1-202ENST00000355633 MBD2Q9UBB5 411 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 HSPB11Q9Y547 144 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 KPTNQ9Y664 436 aa11.1□□□□□ -0.63
HOXA1-202ENST00000355633 ARPC5O15511 151 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 HPRT1P00492 218 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 KRASP01116 189 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 IGLV1-47P01700 117 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 CT45A6P0DMU7 189 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 CT45A5P0DMU8 189 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 CT45A7P0DMV0 189 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 SLC25A6P12236 298 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 M6PRP20645 277 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 PRTN3P24158 256 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 G6PCP35575 357 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 ZNF546Q86UE3 836 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 FOXRED2Q8IWF2 684 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 BEND2Q8NDZ0 799 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 ST6GALNAC6Q969X2 333 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 PLEKHA2Q9HB19 425 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 PLSCR3Q9NRY6 295 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 ZMAT5Q9UDW3 170 aaKnown RBP11.09□□□□□ -0.63
HOXA1-202ENST00000355633 USP9YO00507 2555 aaPredicted RBP11.09□□□□□ -0.63
HOXA1-202ENST00000355633 A0A1B0GU03 582 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 FAM157AC9JC47 383 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 H0YIZ8 118 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 MBPP02686 304 aaPredicted RBP11.09□□□□□ -0.63
HOXA1-202ENST00000355633 REG1BP48304 166 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 LGALSLQ3ZCW2 172 aaPredicted RBP11.09□□□□□ -0.63
HOXA1-202ENST00000355633 PNKDQ8N490 385 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 OR4S2Q8NH73 311 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 RNF126Q9BV68 326 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 MRPL20Q9BYC9 149 aaKnown RBP11.09□□□□□ -0.63
HOXA1-202ENST00000355633 MMP26Q9NRE1 261 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 LSM5Q9Y4Y9 91 aaKnown RBP11.09□□□□□ -0.63
HOXA1-202ENST00000355633 MMP24Q9Y5R2 645 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 CRYBG3Q68DQ2 2970 aa11.09□□□□□ -0.63
HOXA1-202ENST00000355633 SNAPC5O75971 98 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 SLC25A16P16260 332 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 SMCO1Q147U7 214 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 IZUMO4Q1ZYL8 232 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 DEFB113Q30KQ7 82 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 PRSS54Q6PEW0 395 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 TMEM65Q6PI78 240 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 TGIF2LXQ8IUE1 241 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 DCUN1D4Q92564 292 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 HEXA-AS1Q9H8Q6 139 aa11.08□□□□□ -0.64
HOXA1-202ENST00000355633 ZFP57Q9NU63 452 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms