RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 OPN3Q9H1Y3 402 aaPredicted RBP5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 KCNE5Q9UJ90 142 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 RPL34P49207 117 aaKnown RBP5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 MARS2Q96GW9 593 aaKnown RBP5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 CHST5Q9GZS9 411 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 TMEM95Q3KNT9 176 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 LAMA4Q16363 1823 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 ECM29Q5VYK3 1845 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 TMEM250H0YL14 139 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 MGST3O14880 152 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 RBM11P57052 281 aaKnown RBP5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 TMEM45BQ96B21 275 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 MDKP21741 143 aaPredicted RBP5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 PDLIM4P50479 330 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 HKR1P10072 659 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 TMEM170BQ5T4T1 132 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.01□□□□□ -1.611e-13■■■■■ 63.7
SRGAP1-201ENST00000355086 ZNF488Q96MN9 340 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 TTTY12Q9BZ98 90 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 SMAD7O15105 426 aaKnown RBP5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 SEC11BP0C7V7 166 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 ARF6P62330 175 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 FHL5Q5TD97 284 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 XAF1Q6GPH4 301 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 SLC25A34Q6PIV7 304 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 COX14Q96I36 57 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 CEACAM4O75871 244 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 ISG15P05161 165 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 FGF12P61328 243 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 CLPPQ16740 277 aaPredicted RBP5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 IDI2-AS1Q9NZ38 188 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 ACACAQ13085 2346 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 MOSPD3O75425 235 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 HIST1H1AQ02539 215 aaPredicted RBP5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 TNFRSF18Q9Y5U5 241 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 PPIAL4CA0A0B4J2A2 164 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 AHRRA9YTQ3 701 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 H7C1H1 209 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 PPIAL4GP0DN37 164 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 MRPL18Q9H0U6 180 aaKnown RBP5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 SMDT1Q9H4I9 107 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 DDX60Q8IY21 1712 aaKnown RBP5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 CRYBG1Q9Y4K1 1723 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 ARL14EPLP0DKL9 152 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 FGF11Q92914 225 aa5.01□□□□□ -1.61
SRGAP1-201ENST00000355086 FCARP24071 287 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 SSC5DA1L4H1 1573 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 CYB5R3P00387 301 aaPredicted RBP5□□□□□ -1.61
SRGAP1-201ENST00000355086 HTN3P15516 51 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 CXCL3P19876 107 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 DCAF10Q5QP82 559 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 ZNF418Q8TF45 676 aaPredicted RBP5□□□□□ -1.61
SRGAP1-201ENST00000355086 C1QTNF9BB2RNN3 333 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 H0Y980 276 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 REG1AP05451 166 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 HOGA1Q86XE5 327 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 ITLN1Q8WWA0 313 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 MALP21145 153 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 RICTORQ6R327 1708 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 TRBV7-9A0A0J9YWB2 115 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 LHX8Q68G74 356 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 TOMM7Q9P0U1 55 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 SCTP09683 121 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 TDGF1P13385 188 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 CNTFRP26992 372 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 CDK2AP2O75956 126 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 RBKSQ9H477 322 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 CISD3P0C7P0 127 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 MPV17P39210 176 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 PCNX2A6NKB5 2137 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 ASPDHA6ND91 283 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 SIGLEC14Q08ET2 396 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 NRIP2Q9BQI9 281 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 NDUFA2O43678 99 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 TBL2Q9Y4P3 447 aaKnown RBP5□□□□□ -1.61
SRGAP1-201ENST00000355086 HMGA2P52926 109 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 OR51G1Q8NGK1 321 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 DNAJC4Q9NNZ3 241 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 RNF115Q9Y4L5 304 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 HLA-DQA1P01909 254 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 SMIM13P0DJ93 91 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 FAM219BQ5XKK7 198 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 VN1R4Q7Z5H5 301 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 OR5AN1Q8NGI8 311 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 YBX2Q9Y2T7 364 aaKnown RBP5□□□□□ -1.61
SRGAP1-201ENST00000355086 DUSP15Q9H1R2 295 aaPredicted RBP5□□□□□ -1.61
SRGAP1-201ENST00000355086 TRBV20OR9-2A0A075B6H5 130 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 ASAH2BP0C7U1 165 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 DNM1P46Q6ZS02 220 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 BIVMQ86UB2 503 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 FLRT3Q9NZU0 649 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 YLPM1P49750 1951 aaKnown RBP5□□□□□ -1.61
SRGAP1-201ENST00000355086 ABCA7Q8IZY2 2146 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 FXYD3Q14802 87 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 CEACAM21Q3KPI0 293 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 DCAF12L2Q5VW00 463 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 PHLDA1Q8WV24 401 aaPredicted RBP5□□□□□ -1.61
SRGAP1-201ENST00000355086 TLNRD1Q9H1K6 362 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 LINC00862A6NCI5 91 aa5□□□□□ -1.61
SRGAP1-201ENST00000355086 DRD3P35462 400 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms