RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 OR2A7Q96R45 310 aa8.24□□□□□ -1.09
GABPA-201ENST00000354828 B4DSR2 109 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 KCNAB3O43448 404 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 OR2J3O76001 311 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 HIST1H1EP10412 219 aaKnown RBP8.23□□□□□ -1.09
GABPA-201ENST00000354828 ERVFC1-1P60608 527 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 COLCA1Q6ZS62 124 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 C11orf44Q8N8P7 122 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 C16orf92Q96LL3 132 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 PRSS22Q9GZN4 317 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 CTDSP1Q9GZU7 261 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 HIGD1AQ9Y241 93 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 NLRC5Q86WI3 1866 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 MED19A0JLT2 244 aaPredicted RBP8.23□□□□□ -1.09
GABPA-201ENST00000354828 MAP1LC3B2A6NCE7 125 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 CEACAM18A8MTB9 384 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 TM4SF5O14894 197 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 CTDSPLO15194 276 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 DYNLT3P51808 116 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 IGFL3Q6UXB1 125 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 LINC00114Q6XXX2 140 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 RTN4RL2Q86UN3 420 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 RELL2Q8NC24 303 aaPredicted RBP8.23□□□□□ -1.09
GABPA-201ENST00000354828 NECAP1Q8NC96 275 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 MAP1LC3BQ9GZQ8 125 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 EFNA2O43921 213 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 MEF2CQ06413 473 aaPredicted RBP8.23□□□□□ -1.09
GABPA-201ENST00000354828 C1orf100Q5SVJ3 147 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 TEPPQ6URK8 271 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 OR52M1Q8NGK5 317 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 LURAP1Q96LR2 239 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 Q96M66 194 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 DUX5Q96PT3 197 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 ZNF107Q9UII5 783 aaPredicted RBP8.23□□□□□ -1.09
GABPA-201ENST00000354828 BCL2L11O43521 198 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 IGHV1-46P01743 117 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 REG1AP05451 166 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 RRN3P1Q2M238 152 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 MOGAT2Q3SYC2 334 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 OR4P4Q8NGL7 312 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 EEF1AKMT3Q96AZ1 226 aa8.23□□□□□ -1.09
GABPA-201ENST00000354828 IGHV3-35A0A0C4DH35 117 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 MPC2O95563 127 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 S100A8P05109 93 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 CCL3L1P16619 93 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 VDAC2P45880 294 aaPredicted RBP8.22□□□□□ -1.09
GABPA-201ENST00000354828 PSG5Q15238 335 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 LRP11Q86VZ4 500 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 OR4B1Q8NGF8 309 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 MRPL13Q9BYD1 178 aaKnown RBP8.22□□□□□ -1.09
GABPA-201ENST00000354828 TMEM140Q9NV12 185 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 BMPR1BO00238 502 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 HYPMO75409 117 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 B2MP61769 119 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 OXA1LQ15070 435 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 CLEC9AQ6UXN8 241 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 LRRC75AQ8NAA5 344 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 C20orf202A1L168 122 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 KIAA1324LA8MWY0 1029 aaPredicted RBP8.22□□□□□ -1.09
GABPA-201ENST00000354828 SLC31A2O15432 143 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 TCTEX1D1Q8N7M0 179 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 CXorf58Q96LI9 332 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 QTRT1Q9BXR0 403 aaKnown RBP8.22□□□□□ -1.09
GABPA-201ENST00000354828 FBXL15Q9H469 300 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 CLCF1Q9UBD9 225 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 HSF4Q9ULV5 492 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 SLC25A15Q9Y619 301 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 CDS2O95674 445 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 Q5PR19 223 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 STPG3Q8N7X2 389 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 ADAD2Q8NCV1 583 aaKnown RBP8.22□□□□□ -1.09
GABPA-201ENST00000354828 SLC25A28Q96A46 364 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 KPTNQ9Y664 436 aa8.22□□□□□ -1.09
GABPA-201ENST00000354828 TRBV5-7A0A0A0MS05 114 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 SRD5A1P18405 259 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 PRSS54Q6PEW0 395 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 CADM3Q8N126 398 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 ZNRF4Q8WWF5 429 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 WBP1Q96G27 269 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 ZNF426Q9BUY5 554 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 TMEM167BQ9NRX6 74 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 RCC2Q9P258 522 aaKnown RBP8.21□□□□□ -1.09
GABPA-201ENST00000354828 LINC00312Q9Y6C7 94 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 ANAPC1Q9H1A4 1944 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 RNF223E7ERA6 249 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 ORM1P02763 201 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 SPCS3P61009 180 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 RPL30P62888 115 aaKnown RBP8.21□□□□□ -1.09
GABPA-201ENST00000354828 KIAA0141Q14154 515 aaPredicted RBP8.21□□□□□ -1.09
GABPA-201ENST00000354828 FAM90A1Q86YD7 464 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 C8orf46Q8TAG6 207 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 DDB2Q92466 427 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 U3KQ87 197 aa8.21□□□□□ -1.09
GABPA-201ENST00000354828 KBTBD11-OT1A0A1B0GTJ5 212 aa8.21□□□□□ -1.1
GABPA-201ENST00000354828 NPIPB7O75200 414 aa8.21□□□□□ -1.1
GABPA-201ENST00000354828 INHBBP09529 407 aa8.21□□□□□ -1.1
GABPA-201ENST00000354828 SLC25A16P16260 332 aa8.21□□□□□ -1.1
GABPA-201ENST00000354828 HLA-GP17693 338 aa8.21□□□□□ -1.1
GABPA-201ENST00000354828 WNT5AP41221 380 aa8.21□□□□□ -1.1
GABPA-201ENST00000354828 RPL39P5Q59GN2 51 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms