RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 JKAMPQ9P055 326 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 Q9UFV3 132 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 ESPL1Q14674 2120 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 H7BYZ3 331 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 LYZL6O75951 148 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 IFNA21P01568 189 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 EGR1P18146 543 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 DTYMKP23919 212 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 CFPP27918 469 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 CNN1P51911 297 aaKnown RBP8.55□□□□□ -1.04
SYNE1-203ENST00000354674 UNC119Q13432 240 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 OR4A47Q6IF82 309 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 CXorf67Q86X51 503 aaPredicted RBP8.55□□□□□ -1.04
SYNE1-203ENST00000354674 OR51E1Q8TCB6 317 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 FGGYQ96C11 551 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 SRD5A3Q9H8P0 318 aa8.55□□□□□ -1.04
SYNE1-203ENST00000354674 E5RGE8 158 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 MSTNO14793 375 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 SNAI3Q3KNW1 292 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 TMEM41BQ5BJD5 291 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 FFAR4Q5NUL3 377 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 DOK3Q7L591 496 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 COMMD2Q86X83 199 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 SMIM7Q9BQ49 75 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 ELL3Q9HB65 397 aaPredicted RBP8.54□□□□□ -1.04
SYNE1-203ENST00000354674 OBP2BQ9NPH6 170 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 RHBDD3Q9Y3P4 386 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 RAD51DO75771 328 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 FBXW12Q6X9E4 464 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 MDP1Q86V88 176 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 SPSB4Q96A44 273 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 MANBALQ9NQG1 85 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 GPR84Q9NQS5 396 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 ZNF391Q9UJN7 358 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 SHANK1Q9Y566 2161 aa8.54□□□□□ -1.04
SYNE1-203ENST00000354674 CCKARP32238 428 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 BMI1P35226 326 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 CA7P43166 264 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 TAS2R31P59538 309 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 IL24Q13007 206 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 PRR27Q6MZM9 219 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 MRGPRGQ86SM5 289 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 FAM169BQ8N8A8 192 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 CMTM2Q8TAZ6 248 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 OR10A2Q9H208 303 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 FAM230AA0A1W2PPH8 454 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 K7EP13 123 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 SPINK4O60575 86 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 IGKV3-15P01624 115 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 OPN1MWP04001 364 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 GAPDHP04406 335 aaKnown RBP8.53□□□□□ -1.04
SYNE1-203ENST00000354674 CHRM2P08172 466 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 OPN1MW2P0DN77 364 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 OPN1MW3P0DN78 364 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 FAM78BQ5VT40 261 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 FAM90A2PQ658T7 463 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 TMEM211Q6ICI0 200 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 BHLHA15Q7RTS1 189 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-203ENST00000354674 LPAR5Q9H1C0 372 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 TMEM106BQ9NUM4 274 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 TRAPPC1Q9Y5R8 145 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 COX11Q9Y6N1 276 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 PLP2Q04941 152 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 BRICD5Q6PL45 260 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 LYPD6Q86Y78 171 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 OR5C1Q8NGR4 320 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 CLDND2Q8NHS1 167 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 CORO2AQ92828 525 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 C10orf35Q96D05 121 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 ADAT3Q96EY9 351 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-203ENST00000354674 ARHGAP5-AS1Q96IT6 56 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 HDHD3Q9BSH5 251 aaPredicted RBP8.53□□□□□ -1.04
SYNE1-203ENST00000354674 VSIRQ9H7M9 311 aa8.53□□□□□ -1.04
SYNE1-203ENST00000354674 SSSCA1O60232 199 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 DHRS3O75911 302 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 PPOXP50336 477 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 SNU13P55769 128 aaKnown RBP8.52□□□□□ -1.05
SYNE1-203ENST00000354674 UBE2NP61088 152 aaKnown RBP8.52□□□□□ -1.05
SYNE1-203ENST00000354674 KIAA1644Q3SXP7 199 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 LFNGQ8NES3 379 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 OR2D3Q8NGH3 330 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 NAA38Q9BRA0 125 aaKnown RBP8.52□□□□□ -1.05
SYNE1-203ENST00000354674 RBKSQ9H477 322 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 STRAPQ9Y3F4 350 aaKnown RBP8.52□□□□□ -1.05
SYNE1-203ENST00000354674 TLN1Q9Y490 2541 aaKnown RBP8.52□□□□□ -1.05
SYNE1-203ENST00000354674 TRBV24-1A0A075B6N3 115 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 PGPEP1LA6NFU8 196 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 OR2T8A6NH00 312 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 IGLV1-44P01699 117 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 VSIG8P0DPA2 414 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 ZNF93P35789 620 aaPredicted RBP8.52□□□□□ -1.05
SYNE1-203ENST00000354674 SUMO1P63165 101 aaKnown RBP8.52□□□□□ -1.05
SYNE1-203ENST00000354674 GNMTQ14749 295 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 PRR31Q5SQ13 230 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 AMMECR1LQ6DCA0 310 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 SLC24A4Q8NFF2 622 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 TMEM171Q8WVE6 324 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 SLC25A15Q9Y619 301 aa8.52□□□□□ -1.05
SYNE1-203ENST00000354674 IGKV1D-8A0A087WSZ0 117 aa8.51□□□□□ -1.05
SYNE1-203ENST00000354674 C5orf49A4QMS7 147 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms