RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 Q499Y3 187 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 LIN52Q52LA3 116 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 THEM4Q5T1C6 240 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 HAGHLQ6PII5 290 aaPredicted RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF773Q6PK81 442 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 GSG1LQ6UXU4 331 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 LINC00596Q86U02 117 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 KRTAP11-1Q8IUC1 163 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 CPNE9Q8IYJ1 553 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM256Q8N2U0 113 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 PACRGLQ8N7B6 248 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TTLQ8NG68 377 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 OR5T1Q8NG75 326 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 OR4M2Q8NGB6 313 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 OR10G2Q8NGC3 310 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 OR10G4Q8NGN3 311 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 OR10G6Q8NH81 332 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 FRZBQ92765 325 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 RAB8BQ92930 207 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 TAMM41Q96BW9 452 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 DDIT4LQ96D03 193 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 SEH1LQ96EE3 360 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 MRPL48Q96GC5 212 aaKnown RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 ERMAPQ96PL5 475 aaPredicted RBP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 RBP7Q96R05 134 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 PHB2Q99623 299 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 AIF1LQ9BQI0 150 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 C9orf16Q9BUW7 83 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 EMC6Q9BV81 110 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 MROQ9BYG7 248 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 MED28Q9H204 178 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 RBM22Q9NW64 420 aaKnown RBP eCLIP1.07□□□□□ -2.24
BRCA1-202ENST00000354071 DMAC2Q9NW81 257 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 MED11Q9P086 117 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 SNX12Q9UMY4 172 aa1.07□□□□□ -2.24
BRCA1-202ENST00000354071 PKD1P98161 4303 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 TRBV6-6A0A0A6YYG2 114 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 TRAV8-3A0A0A6YYJ7 113 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CENPBD1B2RD01 187 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CLDN25C9JDP6 229 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CCNE2O96020 404 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CYB5R3P00387 301 aaPredicted RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 TCRBP04435 133 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CD2P06729 351 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 SNRPAP09012 282 aaKnown RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF14P17017 642 aaPredicted RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CSRP1P21291 193 aaKnown RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CD79BP40259 229 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 SERPINB9P50453 376 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 LSM3P62310 102 aaKnown RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 NXNL2Q5VZ03 156 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CST9Q5W186 159 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 ZFP2Q6ZN57 461 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 SHISA6Q6ZSJ9 500 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 C6orf120Q7Z4R8 191 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 MDP1Q86V88 176 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 DEFB107AQ8IZN7 70 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 C8orf59Q8N0T1 100 aaPredicted RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 MMGT1Q8N4V1 131 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF615Q8N8J6 731 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 OR4M1Q8NGD0 313 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 MCFD2Q8NI22 146 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF461Q8TAF7 563 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 FAM57AQ8TBR7 257 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 NAT14Q8WUY8 206 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 EEF1AKMT1Q8WVE0 214 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 AP3S1Q92572 193 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 MS4A8Q9BY19 250 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 RHOFQ9HBH0 211 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 SAR1AQ9NR31 198 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 TMEM38BQ9NVV0 291 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 FAM206AQ9NX38 181 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 RAB22AQ9UL26 194 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 TP53TG1Q9Y2A0 90 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 IGSF9BQ9UPX0 1349 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 IGLV3-10A0A075B6K4 115 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 A0A1W2PQL4 384 aaPredicted RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 WI2-2373I1.2A0A1W2PRP0 233 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 H3BQF6 201 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 M0R036 132 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 MYL12BO14950 172 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 SOCS1O15524 211 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 OR2A4O95047 310 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CRYZL1O95825 349 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CGAP01215 116 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CSN2P05814 226 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 CCL5P13501 91 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 ZNF708P17019 499 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 MYL12AP19105 171 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 DTYMKP23919 212 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 RPA3P35244 121 aaPredicted RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 KRTAP10-12P60413 245 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 DSTNP60981 165 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 EIF5AP63241 154 aaKnown RBP1.06□□□□□ -2.24
BRCA1-202ENST00000354071 BATFQ16520 125 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 LRRC75BQ2VPJ9 315 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 SP6Q3SY56 376 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 LAIR2Q6ISS4 152 aa1.06□□□□□ -2.24
BRCA1-202ENST00000354071 KRTAP5-10Q6L8G5 202 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms