RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 IGFBP7Q16270 282 aa11.21□□□□□ -0.61
IFT88-202ENST00000351808 TRIM61Q5EBN2 209 aa11.21□□□□□ -0.61
IFT88-202ENST00000351808 MMD2Q8IY49 270 aa11.21□□□□□ -0.61
IFT88-202ENST00000351808 RDH5Q92781 318 aa11.21□□□□□ -0.61
IFT88-202ENST00000351808 GNB1LQ9BYB4 327 aa11.21□□□□□ -0.61
IFT88-202ENST00000351808 DRD1P21728 446 aa11.21□□□□□ -0.62
IFT88-202ENST00000351808 SRD5A2P31213 254 aa11.21□□□□□ -0.62
IFT88-202ENST00000351808 OR2AE1Q8NHA4 323 aa11.21□□□□□ -0.62
IFT88-202ENST00000351808 RLN3Q8WXF3 142 aa11.21□□□□□ -0.62
IFT88-202ENST00000351808 TRAV9-1A0A075B6T8 112 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 NPIPB13A6NJU9 1138 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 NPIPB4C9JG80 1138 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 CA7P43166 264 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 OR1L1Q8NH94 360 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 UNC13CQ8NB66 2214 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 SCO2A0A1W2PP80 73 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 C22orf46C9J442 243 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 H0Y8X5 98 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 K7EN84 100 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 M0R296 226 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 IGKV1-39P01597 117 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 IGKV1D-39P04432 117 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 PLCXD3Q63HM9 321 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 EBLN2Q6P2I7 272 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 SLC25A47Q6Q0C1 308 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 KCNIP2Q9NS61 270 aa11.2□□□□□ -0.62
IFT88-202ENST00000351808 A0A1W2PQD3 144 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 CLDN1O95832 211 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 SELENOVP59797 346 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 RHOBP62745 196 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 RSPO1Q2MKA7 263 aaPredicted RBP11.19□□□□□ -0.62
IFT88-202ENST00000351808 RPEL1Q2QD12 228 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 BORCS8Q96FH0 119 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 TRAV38-1A0A0B4J264 116 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 GAGE10A6NGK3 116 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 C9orf172C9J069 976 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 H3BMH7 237 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 PPIAL4GP0DN37 164 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 SLC25A6P12236 298 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 RPS21P63220 83 aaKnown RBP11.19□□□□□ -0.62
IFT88-202ENST00000351808 GCSAMLQ5JQS6 135 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 C5orf17Q8NAS9 161 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 ZNF439Q8NDP4 499 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 CLEC5AQ9NY25 188 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 MMP17Q9ULZ9 603 aa11.19□□□□□ -0.62
IFT88-202ENST00000351808 TRBV9A0A0B4J1U6 114 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 BMPR1BO00238 502 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 HLA-DQA1Q5Y7H0 255 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 SPATA12Q7Z6I5 190 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 CRIM1Q9NZV1 1036 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 LIPT2A6NK58 231 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 TNFP01375 233 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 IGKV1-5P01602 117 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 SSTR5P35346 364 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 ZNF157P51786 506 aaPredicted RBP11.18□□□□□ -0.62
IFT88-202ENST00000351808 TRIP6Q15654 476 aaKnown RBP11.18□□□□□ -0.62
IFT88-202ENST00000351808 TMEM136Q6ZRR5 245 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 GP6Q9HCN6 339 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 IGKV1-6A0A0C4DH72 117 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 NPY1RP25929 384 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 GAB4Q2WGN9 574 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 PHYHD1Q5SRE7 291 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 TCF24Q7RTU0 167 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 OOSP2Q86WS3 158 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 CHRDL1Q9BU40 450 aa11.18□□□□□ -0.62
IFT88-202ENST00000351808 PEF1Q9UBV8 284 aaKnown RBP11.18□□□□□ -0.62
IFT88-202ENST00000351808 CDH23Q9H251 3354 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 HSPB6O14558 160 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 CD5LO43866 347 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 TUSC2O75896 110 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 CTSSP25774 331 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 S100GP29377 79 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 FBXW4P57775 412 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 TNXAQ16473 311 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 C2orf27AQ580R0 203 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 DCAF12Q5T6F0 453 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 TMEM14EPQ6UXP3 125 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 ZNF841Q6ZN19 808 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 LRRC61Q9BV99 259 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 NPCDR1Q9BY65 106 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 FNDC4Q9H6D8 234 aaPredicted RBP11.17□□□□□ -0.62
IFT88-202ENST00000351808 FAM181BA6NEQ2 426 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 M0R135 149 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 KIR3DL3Q8N743 410 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 ZNF799Q96GE5 643 aa11.17□□□□□ -0.62
IFT88-202ENST00000351808 TNFSF15O95150 251 aa11.16□□□□□ -0.62
IFT88-202ENST00000351808 TCL1AP56279 114 aa11.16□□□□□ -0.62
IFT88-202ENST00000351808 RBM11P57052 281 aaKnown RBP11.16□□□□□ -0.62
IFT88-202ENST00000351808 DAZAP2Q15038 168 aaPredicted RBP11.16□□□□□ -0.62
IFT88-202ENST00000351808 C12orf54Q6X4T0 127 aa11.16□□□□□ -0.62
IFT88-202ENST00000351808 TMEM147Q9BVK8 224 aa11.16□□□□□ -0.62
IFT88-202ENST00000351808 ARL2-SNX15V9GYD0 113 aa11.16□□□□□ -0.62
IFT88-202ENST00000351808 HSBP1O75506 76 aa11.16□□□□□ -0.62
IFT88-202ENST00000351808 IGKV3-11P04433 115 aa11.16□□□□□ -0.62
IFT88-202ENST00000351808 ZNF16P17020 682 aaPredicted RBP11.16□□□□□ -0.62
IFT88-202ENST00000351808 NTSR1P30989 418 aa11.16□□□□□ -0.62
IFT88-202ENST00000351808 UBE2G1P62253 170 aa11.16□□□□□ -0.62
IFT88-202ENST00000351808 TGFBR3Q03167 851 aa11.16□□□□□ -0.62
IFT88-202ENST00000351808 MRPL54Q6P161 138 aaKnown RBP11.16□□□□□ -0.62
IFT88-202ENST00000351808 ALKBH4Q9NXW9 302 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms