RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 DUX4L9Q6RFH8 374 aaPredicted RBP16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 H2BFWTQ7Z2G1 175 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 LFNGQ8NES3 379 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 DEFB108BQ8NET1 73 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 PLPPR2Q96GM1 343 aa16.87■□□□□ 0.29
CHRNA3-202ENST00000348639 KBTBD11-OT1A0A1B0GTJ5 212 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 NUPL2O15504 423 aaKnown RBP16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 ZNF134P52741 427 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 CASP6P55212 293 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 ARL16Q0P5N6 197 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 GUK1Q16774 197 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 SPANXN5Q5MJ07 72 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 HAPLN4Q86UW8 402 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 TGIF2LYQ8IUE0 185 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 ZCCHC24Q8N2G6 241 aaKnown RBP16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 IFI27L2Q9H2X8 130 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 CLN8Q9UBY8 286 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 SPTA1P02549 2419 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 TRGV10A0A0A0MS01 117 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 MED19A0JLT2 244 aaPredicted RBP16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 SNAPINO95295 136 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 GYPAP02724 150 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 PLA2G5P39877 138 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 PEA15Q15121 130 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 ZNF525Q8N782 197 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 CCL13Q99616 98 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 NGBQ9NPG2 151 aa16.86■□□□□ 0.29
CHRNA3-202ENST00000348639 FAM74A7A6NL05 159 aa16.85■□□□□ 0.29
CHRNA3-202ENST00000348639 MARCH11A6NNE9 402 aa16.85■□□□□ 0.29
CHRNA3-202ENST00000348639 FAM74A3Q4VXF1 159 aa16.85■□□□□ 0.29
CHRNA3-202ENST00000348639 SLC25A24Q6NUK1 477 aa16.85■□□□□ 0.29
CHRNA3-202ENST00000348639 ABHD14AQ9BUJ0 271 aa16.85■□□□□ 0.29
CHRNA3-202ENST00000348639 GFOD1Q9NXC2 390 aa16.85■□□□□ 0.29
CHRNA3-202ENST00000348639 GAB2Q9UQC2 676 aa16.85■□□□□ 0.29
CHRNA3-202ENST00000348639 ROS1P08922 2347 aa16.84■□□□□ 0.29
CHRNA3-202ENST00000348639 VSTM5A8MXK1 200 aa16.84■□□□□ 0.29
CHRNA3-202ENST00000348639 RAB7AP51149 207 aa16.84■□□□□ 0.29
CHRNA3-202ENST00000348639 AKR1C8PQ5T2L2 129 aa16.84■□□□□ 0.29
CHRNA3-202ENST00000348639 TMEM14EPQ6UXP3 125 aa16.84■□□□□ 0.29
CHRNA3-202ENST00000348639 THNSL2Q86YJ6 484 aa16.84■□□□□ 0.29
CHRNA3-202ENST00000348639 DCAF16Q9NXF7 216 aa16.84■□□□□ 0.29
CHRNA3-202ENST00000348639 M0R1X1 148 aa16.84■□□□□ 0.29
CHRNA3-202ENST00000348639 F12P00748 615 aaPredicted RBP16.84■□□□□ 0.29
CHRNA3-202ENST00000348639 KLRB1Q12918 225 aa16.84■□□□□ 0.29
CHRNA3-202ENST00000348639 DPPA3Q6W0C5 159 aa16.84■□□□□ 0.29
CHRNA3-202ENST00000348639 FAM216BQ8N7L0 139 aa16.84■□□□□ 0.29
CHRNA3-202ENST00000348639 SCGB1C1Q8TD33 95 aa16.84■□□□□ 0.29
CHRNA3-202ENST00000348639 PBDC1Q9BVG4 233 aa16.84■□□□□ 0.29
CHRNA3-202ENST00000348639 EIF5A2Q9GZV4 153 aaKnown RBP16.84■□□□□ 0.29
CHRNA3-202ENST00000348639 DYSFO75923 2080 aa16.83■□□□□ 0.29
CHRNA3-202ENST00000348639 RELNP78509 3460 aa16.83■□□□□ 0.29
CHRNA3-202ENST00000348639 A0A1B0GW64 132 aa16.83■□□□□ 0.28
CHRNA3-202ENST00000348639 RBFOX2O43251 390 aaKnown RBP eCLIP16.83■□□□□ 0.28
CHRNA3-202ENST00000348639 FCGR3BO75015 233 aa16.83■□□□□ 0.28
CHRNA3-202ENST00000348639 HPRT1P00492 218 aa16.83■□□□□ 0.28
CHRNA3-202ENST00000348639 RPL39P5Q59GN2 51 aa16.83■□□□□ 0.28
CHRNA3-202ENST00000348639 TCF23Q7RTU1 214 aa16.83■□□□□ 0.28
CHRNA3-202ENST00000348639 CORO2AQ92828 525 aa16.83■□□□□ 0.28
CHRNA3-202ENST00000348639 R3HDM4Q96D70 268 aa16.83■□□□□ 0.28
CHRNA3-202ENST00000348639 PARD6GQ9BYG4 376 aaPredicted RBP16.83■□□□□ 0.28
CHRNA3-202ENST00000348639 HIPK2Q9H2X6 1198 aa16.83■□□□□ 0.28
CHRNA3-202ENST00000348639 LINC00574Q9H8X3 128 aa16.83■□□□□ 0.28
CHRNA3-202ENST00000348639 DIDO1Q9BTC0 2240 aaKnown RBP16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 BTBD17A6NE02 478 aa16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 PPIHO43447 177 aaKnown RBP16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 IGHV3-7P01780 117 aa16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 OR8U8P0C7N1 319 aa16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 LILRB2Q8N423 598 aa16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 EGLN1Q9GZT9 426 aa16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 FBXO7Q9Y3I1 522 aa16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 SLC31A2O15432 143 aa16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 H2AFB1P0C5Y9 115 aa16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 TLE1Q04724 770 aa16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 LRRC75BQ2VPJ9 315 aa16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 SPSB3Q6PJ21 355 aa16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 CIB3Q96Q77 187 aaPredicted RBP16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 PRELID3BQ9Y3B1 194 aa16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 KPTNQ9Y664 436 aa16.82■□□□□ 0.28
CHRNA3-202ENST00000348639 LOC105371267A0A1B0GV96 52 aa16.81■□□□□ 0.28
CHRNA3-202ENST00000348639 ZNF729A6NN14 1252 aaPredicted RBP16.81■□□□□ 0.28
CHRNA3-202ENST00000348639 FAM90A9PA6NNJ1 464 aa16.81■□□□□ 0.28
CHRNA3-202ENST00000348639 NPBWR1P48145 328 aa16.81■□□□□ 0.28
CHRNA3-202ENST00000348639 PPT1P50897 306 aa16.81■□□□□ 0.28
CHRNA3-202ENST00000348639 CT45A1Q5HYN5 189 aa16.81■□□□□ 0.28
CHRNA3-202ENST00000348639 NCMAPQ5T1S8 102 aa16.81■□□□□ 0.28
CHRNA3-202ENST00000348639 SP5Q6BEB4 398 aaPredicted RBP16.81■□□□□ 0.28
CHRNA3-202ENST00000348639 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.81■□□□□ 0.28
CHRNA3-202ENST00000348639 CT45A3Q8NHU0 189 aa16.81■□□□□ 0.28
CHRNA3-202ENST00000348639 DTD1Q8TEA8 209 aa16.81■□□□□ 0.28
CHRNA3-202ENST00000348639 PSMG3Q9BT73 122 aaPredicted RBP16.81■□□□□ 0.28
CHRNA3-202ENST00000348639 SAP30LQ9HAJ7 183 aa16.81■□□□□ 0.28
CHRNA3-202ENST00000348639 DSCAML1Q8TD84 2053 aa16.81■□□□□ 0.28
CHRNA3-202ENST00000348639 RAI1Q7Z5J4 1906 aaPredicted RBP16.81■□□□□ 0.28
CHRNA3-202ENST00000348639 TRAV38-1A0A0B4J264 116 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 NKX6-3A6NJ46 265 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 FAM90A27PA6NNH2 459 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 SHISA9B4DS77 424 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 GPR37O15354 613 aa16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 RBMXL2O75526 392 aaKnown RBP16.8■□□□□ 0.28
CHRNA3-202ENST00000348639 CA7P43166 264 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms