RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 OR2M3Q8NG83 312 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 TMEM56Q96MV1 263 aa9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 TECRQ9NZ01 308 aaKnown RBP9.63□□□□□ -0.87
SMARCE1-202ENST00000348513 FGF16O43320 207 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 SSBP2P81877 361 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 OR8G5Q8NG78 346 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 PRDM13Q9H4Q3 707 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 HILPDAQ9Y5L2 63 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 RAC3P60763 192 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 RELBQ01201 579 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 GAGE13Q4V321 117 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 ACSM6Q6P461 480 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 RND1Q92730 232 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 LIPT2A6NK58 231 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 ISG15P05161 165 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 CXXC4Q9H2H0 198 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 SH2D7A6NKC9 451 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 C1QAP02745 245 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 CD5P06127 495 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 CTSDP07339 412 aaPredicted RBP9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 PPP1CCP36873 323 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 TMEM95Q3KNT9 176 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 NPEPL1Q8NDH3 523 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 WDR54Q9H977 334 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 MRM2Q9UI43 246 aaKnown RBP9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 C3orf85A0A1B0GTC6 90 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 EPOPA6NHQ4 379 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 CELA2AP08217 269 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 RAB1BQ9H0U4 201 aa9.62□□□□□ -0.87
SMARCE1-202ENST00000348513 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 HSD52Q0P140 79 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 TMEM91Q6ZNR0 172 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 MOGAT3Q86VF5 341 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 FAM219AQ8IW50 185 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 C9orf40Q8IXQ3 194 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 TMEM147Q9BVK8 224 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 TRPM6Q9BX84 2022 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 SCN3AQ9NY46 2000 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 A0A1W2PP11 408 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 ATG4DQ86TL0 474 aaPredicted RBP9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 APCDD1LQ8NCL9 501 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 OR4X2Q8NGF9 303 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 RNASEH2CQ8TDP1 164 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 TSSC4Q9Y5U2 329 aaPredicted RBP9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 CTXND1A0A1B0GTU2 59 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 TYMSP04818 313 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 SRSF6Q13247 344 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 TRAT1Q6PIZ9 186 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 SLC22A18ASQ8N1D0 253 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 SPANXCQ9NY87 97 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 ZNF638Q14966 1978 aaKnown RBP9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 IGHV3OR15-7A0A075B7D8 119 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 LRRC3CA6NJW4 275 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 FFAR1O14842 300 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 COX6CP09669 75 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 SLC35B1P78383 322 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 CD300LDQ6UXZ3 194 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 RGPD4Q7Z3J3 1758 aa9.61□□□□□ -0.87
SMARCE1-202ENST00000348513 TRAV5A0A0B4J249 113 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 SLC25A30Q5SVS4 291 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 DMKNQ6E0U4 476 aaPredicted RBP9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 RNASE8Q8TDE3 154 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 THSD7AQ9UPZ6 1657 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 A0A0G2JLM5 398 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 PLAURQ03405 335 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 MEF2CQ06413 473 aaPredicted RBP9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 NRN1Q9NPD7 142 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 IL36GQ9NZH8 169 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 UFC1Q9Y3C8 167 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 ZNF415Q09FC8 603 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 TEX38Q6PEX7 206 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 SP7Q8TDD2 431 aaPredicted RBP9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 MRPS16Q9Y3D3 137 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 PLXNB2O15031 1838 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 C21orf140B9A014 251 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 SRP19P09132 144 aaKnown RBP9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 MPZP25189 248 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 VAX1Q5SQQ9 334 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 C10orf111Q8N326 155 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 AURKAIP1Q9NWT8 199 aaPredicted RBP9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 CACNG5Q9UF02 275 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 POLR3KQ9Y2Y1 108 aaPredicted RBP9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 SCN4AP35499 1836 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 APELAP0DMC3 54 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 C5orf47Q569G3 176 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 TSPO2Q5TGU0 170 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 C20orf144Q9BQM9 153 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 MAP1LC3AQ9H492 121 aa9.6□□□□□ -0.87
SMARCE1-202ENST00000348513 hADV38S2A0JD32 116 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 PDCD6O75340 191 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 CXCL1P09341 107 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 VSTM2AQ8TAG5 236 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 PRDM6Q9NQX0 595 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 SLC7A10Q9NS82 523 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 CENPVL1A0A0U1RR11 272 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 C1QCP02747 245 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 S100A4P26447 101 aaKnown RBP9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 CRYBA4P53673 196 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 RHOBP62745 196 aa9.59□□□□□ -0.87
SMARCE1-202ENST00000348513 RIGQ13278 110 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms