RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 IFI6P09912 130 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 UNQ9370/PRO34162Q6UXP9 181 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 MRAP2Q96G30 205 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 PLAUP00749 431 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 AMY1AP04745 511 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 NPPCP23582 126 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 DCAF12L2Q5VW00 463 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 RHOVQ96L33 236 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 RTN4RQ9BZR6 473 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 C2orf83Q53S99 150 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 KCNK7Q9Y2U2 307 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 ERGP11308 486 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 HS3ST3B1Q9Y662 390 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 NDUFB4O95168 129 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 OR4C13Q8NGP0 309 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 DLL3Q9NYJ7 618 aa19.86■□□□□ 0.77
NPAS3-201ENST00000346562 TRBV5-5A0A0J9YX44 114 aa19.85■□□□□ 0.77
NPAS3-201ENST00000346562 H7C2G1 150 aa19.85■□□□□ 0.77
NPAS3-201ENST00000346562 GZMMP51124 257 aa19.85■□□□□ 0.77
NPAS3-201ENST00000346562 HSPE1P61604 102 aaKnown RBP19.85■□□□□ 0.77
NPAS3-201ENST00000346562 RBM38Q9H0Z9 239 aaKnown RBP19.85■□□□□ 0.77
NPAS3-201ENST00000346562 NPFFO15130 113 aa19.85■□□□□ 0.77
NPAS3-201ENST00000346562 TRGC1P0CF51 173 aa19.85■□□□□ 0.77
NPAS3-201ENST00000346562 CDCP2Q5VXM1 449 aa19.85■□□□□ 0.77
NPAS3-201ENST00000346562 DNAJC4Q9NNZ3 241 aa19.85■□□□□ 0.77
NPAS3-201ENST00000346562 SMIM6P0DI80 62 aa19.85■□□□□ 0.77
NPAS3-201ENST00000346562 RUNX1Q01196 453 aa19.85■□□□□ 0.77
NPAS3-201ENST00000346562 UBE2V2Q15819 145 aa19.85■□□□□ 0.77
NPAS3-201ENST00000346562 RBFOX2O43251 390 aaKnown RBP eCLIP19.84■□□□□ 0.77
NPAS3-201ENST00000346562 RNASE1P07998 156 aaKnown RBP19.84■□□□□ 0.77
NPAS3-201ENST00000346562 POM121Q96HA1 1249 aa19.84■□□□□ 0.77
NPAS3-201ENST00000346562 IGKV1-8A0A0C4DH67 115 aa19.84■□□□□ 0.77
NPAS3-201ENST00000346562 PNKDQ8N490 385 aa19.84■□□□□ 0.77
NPAS3-201ENST00000346562 SNRPCP09234 159 aaKnown RBP19.84■□□□□ 0.77
NPAS3-201ENST00000346562 PTGDSP41222 190 aa19.84■□□□□ 0.77
NPAS3-201ENST00000346562 ZNF56Q15929 161 aa19.84■□□□□ 0.77
NPAS3-201ENST00000346562 DNLZQ5SXM8 178 aa19.84■□□□□ 0.77
NPAS3-201ENST00000346562 SELENOHQ8IZQ5 122 aaKnown RBP19.84■□□□□ 0.77
NPAS3-201ENST00000346562 TMEM252Q8N6L7 170 aa19.84■□□□□ 0.77
NPAS3-201ENST00000346562 PAM16Q9Y3D7 125 aa19.84■□□□□ 0.77
NPAS3-201ENST00000346562 PPP1R17O96001 155 aa19.84■□□□□ 0.77
NPAS3-201ENST00000346562 LIMS1P48059 325 aa19.84■□□□□ 0.77
NPAS3-201ENST00000346562 PKIAP61925 76 aa19.84■□□□□ 0.77
NPAS3-201ENST00000346562 ERASQ7Z444 233 aa19.84■□□□□ 0.77
NPAS3-201ENST00000346562 ZNF383Q8NA42 475 aa19.84■□□□□ 0.77
NPAS3-201ENST00000346562 TCTAP57738 103 aa19.83■□□□□ 0.77
NPAS3-201ENST00000346562 PGLYRP4Q96LB8 373 aa19.83■□□□□ 0.77
NPAS3-201ENST00000346562 OR51M1Q9H341 326 aa19.83■□□□□ 0.77
NPAS3-201ENST00000346562 RIPPLY2Q5TAB7 128 aa19.83■□□□□ 0.77
NPAS3-201ENST00000346562 MIC13Q5XKP0 118 aa19.83■□□□□ 0.77
NPAS3-201ENST00000346562 SRXN1Q9BYN0 137 aa19.83■□□□□ 0.77
NPAS3-201ENST00000346562 FGFRL1Q8N441 504 aa19.83■□□□□ 0.76
NPAS3-201ENST00000346562 RFLNBQ8N5W9 214 aa19.83■□□□□ 0.76
NPAS3-201ENST00000346562 TUBA4BQ9H853 241 aa19.83■□□□□ 0.76
NPAS3-201ENST00000346562 FXYD3Q14802 87 aa19.83■□□□□ 0.76
NPAS3-201ENST00000346562 SNAI3Q3KNW1 292 aa19.83■□□□□ 0.76
NPAS3-201ENST00000346562 MEIG1Q5JSS6 88 aa19.83■□□□□ 0.76
NPAS3-201ENST00000346562 CYB561D1Q8N8Q1 229 aa19.83■□□□□ 0.76
NPAS3-201ENST00000346562 ZNF25P17030 456 aaPredicted RBP19.82■□□□□ 0.76
NPAS3-201ENST00000346562 HLA-DQA1P01909 254 aa19.82■□□□□ 0.76
NPAS3-201ENST00000346562 APOBEC3AP31941 199 aaPredicted RBP19.82■□□□□ 0.76
NPAS3-201ENST00000346562 TMEM177Q53S58 311 aa19.82■□□□□ 0.76
NPAS3-201ENST00000346562 SCN9AQ15858 1988 aa19.82■□□□□ 0.76
NPAS3-201ENST00000346562 NUTF2P61970 127 aaKnown RBP19.82■□□□□ 0.76
NPAS3-201ENST00000346562 C19orf24Q9BVV8 132 aa19.82■□□□□ 0.76
NPAS3-201ENST00000346562 MRPL32Q9BYC8 188 aaKnown RBP19.82■□□□□ 0.76
NPAS3-201ENST00000346562 IGLV1-36A0A0B4J1U3 117 aa19.82■□□□□ 0.76
NPAS3-201ENST00000346562 GDF9O60383 454 aa19.82■□□□□ 0.76
NPAS3-201ENST00000346562 PLA2G10O15496 165 aa19.82■□□□□ 0.76
NPAS3-201ENST00000346562 C8orf88P0DMB2 117 aa19.82■□□□□ 0.76
NPAS3-201ENST00000346562 ZNF146Q15072 292 aa19.82■□□□□ 0.76
NPAS3-201ENST00000346562 TAF15Q92804 592 aaKnown RBP eCLIP19.82■□□□□ 0.76
NPAS3-201ENST00000346562 DNASE2BQ8WZ79 361 aa19.81■□□□□ 0.76
NPAS3-201ENST00000346562 GPR146Q96CH1 333 aa19.81■□□□□ 0.76
NPAS3-201ENST00000346562 J3QW42 95 aa19.81■□□□□ 0.76
NPAS3-201ENST00000346562 FAM181AQ8N9Y4 354 aa19.81■□□□□ 0.76
NPAS3-201ENST00000346562 ZNHIT1O43257 154 aa19.81■□□□□ 0.76
NPAS3-201ENST00000346562 PCOLCEQ15113 449 aa19.81■□□□□ 0.76
NPAS3-201ENST00000346562 HSPB1P04792 205 aaKnown RBP19.8■□□□□ 0.76
NPAS3-201ENST00000346562 COTL1Q14019 142 aa19.8■□□□□ 0.76
NPAS3-201ENST00000346562 OR5AC2Q9NZP5 309 aa19.8■□□□□ 0.76
NPAS3-201ENST00000346562 TMEM262E9PQX1 116 aa19.8■□□□□ 0.76
NPAS3-201ENST00000346562 TGIF1Q15583 401 aa19.8■□□□□ 0.76
NPAS3-201ENST00000346562 C10orf111Q8N326 155 aa19.8■□□□□ 0.76
NPAS3-201ENST00000346562 MARCH11A6NNE9 402 aa19.8■□□□□ 0.76
NPAS3-201ENST00000346562 ATP1A1-AS1Q5TC04 95 aa19.8■□□□□ 0.76
NPAS3-201ENST00000346562 LOC102724200A0A096LPH7 203 aaPredicted RBP19.8■□□□□ 0.76
NPAS3-201ENST00000346562 UNC119Q13432 240 aa19.8■□□□□ 0.76
NPAS3-201ENST00000346562 PAPPA-AS1Q5QFB9 102 aa19.8■□□□□ 0.76
NPAS3-201ENST00000346562 FAM159AQ6UWV7 190 aa19.8■□□□□ 0.76
NPAS3-201ENST00000346562 OR51G1Q8NGK1 321 aa19.8■□□□□ 0.76
NPAS3-201ENST00000346562 LHFPL6Q9Y693 200 aa19.8■□□□□ 0.76
NPAS3-201ENST00000346562 IGHV3OR16-10A0A075B7F0 116 aa19.79■□□□□ 0.76
NPAS3-201ENST00000346562 TMEM54Q969K7 222 aa19.79■□□□□ 0.76
NPAS3-201ENST00000346562 TRAF4Q9BUZ4 470 aaPredicted RBP19.79■□□□□ 0.76
NPAS3-201ENST00000346562 FAM206AQ9NX38 181 aa19.79■□□□□ 0.76
NPAS3-201ENST00000346562 LINC00862A6NCI5 91 aa19.79■□□□□ 0.76
NPAS3-201ENST00000346562 REG1AP05451 166 aa19.79■□□□□ 0.76
NPAS3-201ENST00000346562 AQP3Q92482 292 aa19.79■□□□□ 0.76
NPAS3-201ENST00000346562 GPR132Q9UNW8 380 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms