RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 PHB2Q99623 299 aa12.93□□□□□ -0.34
RAB5C-201ENST00000346213 HILPDAQ9Y5L2 63 aa12.93□□□□□ -0.34
RAB5C-201ENST00000346213 A0A0B4J2A0 478 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 A0A1W2PPH5 198 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 TSPAN9O75954 239 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 RGS11O94810 467 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 SIX6O95475 246 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 SFT2D2O95562 160 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 IGLV1-47P01700 117 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 CTSDP07339 412 aaPredicted RBP12.92□□□□□ -0.34
RAB5C-201ENST00000346213 HABP2Q14520 560 aaPredicted RBP12.92□□□□□ -0.34
RAB5C-201ENST00000346213 PAN3Q58A45 887 aaKnown RBP12.92□□□□□ -0.34
RAB5C-201ENST00000346213 LY6G6FQ5SQ64 297 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 ZNF880Q6PDB4 577 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 SHISA2Q6UWI4 295 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 HEPN1Q6WQI6 88 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 OR4F5Q8NH21 305 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 KIRREL1Q96J84 757 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 CITED1Q99966 193 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 C16orf95Q9H693 158 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 SHPKQ9UHJ6 478 aa12.92□□□□□ -0.34
RAB5C-201ENST00000346213 C14orf166Q9Y224 244 aaKnown RBP12.92□□□□□ -0.34
RAB5C-201ENST00000346213 PGAM2P15259 253 aa12.91□□□□□ -0.34
RAB5C-201ENST00000346213 VAMP1P23763 118 aa12.91□□□□□ -0.34
RAB5C-201ENST00000346213 CD24P25063 80 aa12.91□□□□□ -0.34
RAB5C-201ENST00000346213 DIAPH2-AS1Q14236 149 aa12.91□□□□□ -0.34
RAB5C-201ENST00000346213 Q5BKY6 102 aa12.91□□□□□ -0.34
RAB5C-201ENST00000346213 DHRS7BQ6IAN0 325 aaPredicted RBP12.91□□□□□ -0.34
RAB5C-201ENST00000346213 C11orf88Q6PI97 169 aa12.91□□□□□ -0.34
RAB5C-201ENST00000346213 OR5M8Q8NGP6 311 aa12.91□□□□□ -0.34
RAB5C-201ENST00000346213 OR13D1Q8NGV5 346 aa12.91□□□□□ -0.34
RAB5C-201ENST00000346213 MRGPRDQ8TDS7 321 aa12.91□□□□□ -0.34
RAB5C-201ENST00000346213 SLA2Q9H6Q3 261 aa12.91□□□□□ -0.34
RAB5C-201ENST00000346213 RNF114Q9Y508 228 aa12.91□□□□□ -0.34
RAB5C-201ENST00000346213 TRGV10A0A0A0MS01 117 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 A6NDX4 124 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 DBX1A6NMT0 343 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 GLP1RP43220 463 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 KIR2DS4P43632 304 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 UCP3P55916 312 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 KIR2DS1Q14954 304 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 ABHD12Q8N2K0 398 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 OR5R1Q8NH85 324 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 RFESDQ8TAC1 157 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 MRPL30Q8TCC3 161 aaKnown RBP12.9□□□□□ -0.34
RAB5C-201ENST00000346213 WDR89Q96FK6 387 aaPredicted RBP12.9□□□□□ -0.34
RAB5C-201ENST00000346213 CLEC7AQ9BXN2 247 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 GON7Q9BXV9 100 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 TAS2R3Q9NYW6 316 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 CALYQ9NYX4 217 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 SLC23A1Q9UHI7 598 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 GLS2Q9UI32 602 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 TCF19Q9Y242 345 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 PRELID1Q9Y255 219 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 TBL2Q9Y4P3 447 aaKnown RBP12.9□□□□□ -0.34
RAB5C-201ENST00000346213 HSPB11Q9Y547 144 aa12.9□□□□□ -0.34
RAB5C-201ENST00000346213 TRDCB7Z8K6 153 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 LY6LH3BQJ8 138 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 SNAPC5O75971 98 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 CRYBA1P05813 215 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 CTXN2P0C2S0 81 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 PI3P19957 117 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 FCGR2CP31995 323 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 RPL15P61313 204 aaKnown RBP12.89□□□□□ -0.35
RAB5C-201ENST00000346213 SUPT4H1P63272 117 aaKnown RBP12.89□□□□□ -0.35
RAB5C-201ENST00000346213 PAX5Q02548 391 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 PRR31Q5SQ13 230 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 LIN54Q6MZP7 749 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 GAPTQ8N292 157 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 CASTOR1Q8WTX7 329 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 FXYD6Q9H0Q3 95 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 LINC00574Q9H8X3 128 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 ZNF702PQ9H963 129 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 A0A087X0M5 115 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 KBTBD11-OT1A0A1B0GTJ5 212 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 A0A1B0GX30 115 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 hCG_1809904A0A1W2PP81 198 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 A0A1W2PPE2 198 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 A0A1W2PR64 198 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 A0A1W2PRV1 198 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 C15orf65H3BRN8 121 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 AANATQ16613 207 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 LTC4SQ16873 150 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 MOB3AQ96BX8 217 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 MALSU1Q96EH3 234 aa12.89□□□□□ -0.35
RAB5C-201ENST00000346213 NPIPB11E5RHQ5 1161 aa12.88□□□□□ -0.35
RAB5C-201ENST00000346213 CRYZL1O95825 349 aa12.88□□□□□ -0.35
RAB5C-201ENST00000346213 LGALS4P56470 323 aa12.88□□□□□ -0.35
RAB5C-201ENST00000346213 TMEM95Q3KNT9 176 aa12.88□□□□□ -0.35
RAB5C-201ENST00000346213 IGSF11Q5DX21 431 aa12.88□□□□□ -0.35
RAB5C-201ENST00000346213 A0A1W2PPE3 182 aa12.87□□□□□ -0.35
RAB5C-201ENST00000346213 ZNF729A6NN14 1252 aaPredicted RBP12.87□□□□□ -0.35
RAB5C-201ENST00000346213 SCTP09683 121 aa12.87□□□□□ -0.35
RAB5C-201ENST00000346213 AADACP22760 399 aa12.87□□□□□ -0.35
RAB5C-201ENST00000346213 HLA-DRB5Q30154 266 aa12.87□□□□□ -0.35
RAB5C-201ENST00000346213 LGALSLQ3ZCW2 172 aaPredicted RBP12.87□□□□□ -0.35
RAB5C-201ENST00000346213 ZNF497Q6ZNH5 498 aa12.87□□□□□ -0.35
RAB5C-201ENST00000346213 MOB1BQ7L9L4 216 aa12.87□□□□□ -0.35
RAB5C-201ENST00000346213 COQ8AQ8NI60 647 aa12.87□□□□□ -0.35
RAB5C-201ENST00000346213 GAL3ST2Q9H3Q3 398 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms