RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 HIST1H1AQ02539 215 aaPredicted RBP16.87■□□□□ 0.29
HDAC4-201ENST00000345617 BHLHA15Q7RTS1 189 aaPredicted RBP16.87■□□□□ 0.29
HDAC4-201ENST00000345617 OR1K1Q8NGR3 316 aa16.87■□□□□ 0.29
HDAC4-201ENST00000345617 PTP4A3O75365 173 aa16.87■□□□□ 0.29
HDAC4-201ENST00000345617 IGHV3-43A0A0B4J1X8 118 aa16.87■□□□□ 0.29
HDAC4-201ENST00000345617 IGHV3-43DP0DP04 118 aa16.87■□□□□ 0.29
HDAC4-201ENST00000345617 EBLN2Q6P2I7 272 aa16.87■□□□□ 0.29
HDAC4-201ENST00000345617 PLCE1Q9P212 2302 aa16.87■□□□□ 0.29
HDAC4-201ENST00000345617 FBLIM1Q8WUP2 373 aa16.87■□□□□ 0.29
HDAC4-201ENST00000345617 IL36RNQ9UBH0 155 aa16.87■□□□□ 0.29
HDAC4-201ENST00000345617 C2orf83Q53S99 150 aa16.87■□□□□ 0.29
HDAC4-201ENST00000345617 SERGEFQ9UGK8 458 aa16.87■□□□□ 0.29
HDAC4-201ENST00000345617 TNCP24821 2201 aa16.86■□□□□ 0.29
HDAC4-201ENST00000345617 FAM71F2Q6NXP2 309 aa16.86■□□□□ 0.29
HDAC4-201ENST00000345617 ROM1Q03395 351 aa16.86■□□□□ 0.29
HDAC4-201ENST00000345617 GPR35Q9HC97 309 aa16.86■□□□□ 0.29
HDAC4-201ENST00000345617 OR4D5Q8NGN0 318 aa16.86■□□□□ 0.29
HDAC4-201ENST00000345617 SRSF5Q13243 272 aaKnown RBP16.86■□□□□ 0.29
HDAC4-201ENST00000345617 AUP1Q9Y679 476 aa16.86■□□□□ 0.29
HDAC4-201ENST00000345617 CD8AP01732 235 aa16.86■□□□□ 0.29
HDAC4-201ENST00000345617 PHF7Q9BWX1 381 aaPredicted RBP16.86■□□□□ 0.29
HDAC4-201ENST00000345617 TRAV8-7A0A075B6U6 113 aa16.86■□□□□ 0.29
HDAC4-201ENST00000345617 DLL1O00548 723 aa16.86■□□□□ 0.29
HDAC4-201ENST00000345617 VSIG8P0DPA2 414 aa16.86■□□□□ 0.29
HDAC4-201ENST00000345617 AQP3Q92482 292 aa16.86■□□□□ 0.29
HDAC4-201ENST00000345617 MED13Q9UHV7 2174 aa16.86■□□□□ 0.29
HDAC4-201ENST00000345617 MOSPD3O75425 235 aa16.85■□□□□ 0.29
HDAC4-201ENST00000345617 PRSS2P07478 247 aa16.85■□□□□ 0.29
HDAC4-201ENST00000345617 NHSL1Q5SYE7 1610 aa16.85■□□□□ 0.29
HDAC4-201ENST00000345617 LINC01549A6NIU2 74 aa16.85■□□□□ 0.29
HDAC4-201ENST00000345617 F12P00748 615 aaPredicted RBP16.85■□□□□ 0.29
HDAC4-201ENST00000345617 PIGYQ3MUY2 71 aa16.85■□□□□ 0.29
HDAC4-201ENST00000345617 COL5A3P25940 1745 aaPredicted RBP16.85■□□□□ 0.29
HDAC4-201ENST00000345617 RPL8P62917 257 aaKnown RBP16.85■□□□□ 0.29
HDAC4-201ENST00000345617 COL24A1Q17RW2 1714 aa16.85■□□□□ 0.29
HDAC4-201ENST00000345617 ARHGAP32A7KAX9 2087 aa16.85■□□□□ 0.29
HDAC4-201ENST00000345617 H3BRM9 83 aa16.85■□□□□ 0.29
HDAC4-201ENST00000345617 FCGR3AP08637 254 aa16.85■□□□□ 0.29
HDAC4-201ENST00000345617 ACER2Q5QJU3 275 aa16.85■□□□□ 0.29
HDAC4-201ENST00000345617 LRTM2Q8N967 370 aa16.85■□□□□ 0.29
HDAC4-201ENST00000345617 RTP5Q14D33 572 aa16.84■□□□□ 0.29
HDAC4-201ENST00000345617 TAF15Q92804 592 aaKnown RBP eCLIP16.84■□□□□ 0.291e-6■□□□□ 11.1
HDAC4-201ENST00000345617 ZNF430Q9H8G1 570 aaPredicted RBP16.84■□□□□ 0.29
HDAC4-201ENST00000345617 CARHSP1Q9Y2V2 147 aaKnown RBP16.84■□□□□ 0.29
HDAC4-201ENST00000345617 DMRTC1Q5HYR2 192 aa16.84■□□□□ 0.29
HDAC4-201ENST00000345617 DMRTA1Q5VZB9 504 aa16.84■□□□□ 0.29
HDAC4-201ENST00000345617 B4E171 279 aa16.84■□□□□ 0.29
HDAC4-201ENST00000345617 INO80CQ6PI98 192 aaPredicted RBP16.84■□□□□ 0.29
HDAC4-201ENST00000345617 LINC00469Q8N7U9 141 aa16.84■□□□□ 0.29
HDAC4-201ENST00000345617 MARS2Q96GW9 593 aaKnown RBP16.84■□□□□ 0.29
HDAC4-201ENST00000345617 PLXNA2O75051 1894 aa16.84■□□□□ 0.29
HDAC4-201ENST00000345617 GPX4P36969 197 aaPredicted RBP16.84■□□□□ 0.29
HDAC4-201ENST00000345617 GSN-AS1Q9NRJ2 163 aa16.84■□□□□ 0.29
HDAC4-201ENST00000345617 MRPL52Q86TS9 123 aaKnown RBP16.84■□□□□ 0.29
HDAC4-201ENST00000345617 CCL4L1Q8NHW4 92 aa16.84■□□□□ 0.29
HDAC4-201ENST00000345617 TLNRD1Q9H1K6 362 aa16.84■□□□□ 0.29
HDAC4-201ENST00000345617 RNF7Q9UBF6 113 aa16.84■□□□□ 0.29
HDAC4-201ENST00000345617 PARLQ9H300 379 aa16.84■□□□□ 0.29
HDAC4-201ENST00000345617 ST6GALNAC2Q9UJ37 374 aa16.84■□□□□ 0.29
HDAC4-201ENST00000345617 TRGV8A0A0C4DH27 118 aa16.83■□□□□ 0.29
HDAC4-201ENST00000345617 KLK2P20151 261 aa16.83■□□□□ 0.29
HDAC4-201ENST00000345617 COX7A1P24310 79 aa16.83■□□□□ 0.29
HDAC4-201ENST00000345617 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.83■□□□□ 0.29
HDAC4-201ENST00000345617 C16orf92Q96LL3 132 aa16.83■□□□□ 0.29
HDAC4-201ENST00000345617 MGST2Q99735 147 aa16.83■□□□□ 0.29
HDAC4-201ENST00000345617 NPDC1Q9NQX5 325 aaPredicted RBP16.83■□□□□ 0.29
HDAC4-201ENST00000345617 CLDN14O95500 239 aa16.83■□□□□ 0.28
HDAC4-201ENST00000345617 RTN4RL1Q86UN2 441 aaPredicted RBP16.83■□□□□ 0.28
HDAC4-201ENST00000345617 ADAMTSL1Q8N6G6 1762 aa16.83■□□□□ 0.28
HDAC4-201ENST00000345617 GNRHR2Q96P88 292 aa16.83■□□□□ 0.28
HDAC4-201ENST00000345617 LINC00869P0C866 280 aa16.83■□□□□ 0.28
HDAC4-201ENST00000345617 DEFB109BQ30KR1 87 aa16.83■□□□□ 0.28
HDAC4-201ENST00000345617 SAPCD1Q5SSQ6 148 aa16.83■□□□□ 0.28
HDAC4-201ENST00000345617 PLPPR2Q96GM1 343 aa16.83■□□□□ 0.28
HDAC4-201ENST00000345617 SIPA1L1O43166 1804 aa16.83■□□□□ 0.28
HDAC4-201ENST00000345617 IFI6P09912 130 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 DNAJC4Q9NNZ3 241 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 HCSTQ9UBK5 93 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 GCM2O75603 506 aaPredicted RBP16.82■□□□□ 0.28
HDAC4-201ENST00000345617 ZNF600Q6ZNG1 722 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 MS4A4AQ96JQ5 239 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 TRBV5-3A0A0A0MS03 114 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 MYOGP15173 224 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 ARF6P62330 175 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 ERVH48-1M5A8F1 160 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 OR2Y1Q8NGV0 311 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 HIST1H2BAQ96A08 127 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 CD3EP07766 207 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 C10orf111Q8N326 155 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 AURKAIP1Q9NWT8 199 aaPredicted RBP16.82■□□□□ 0.28
HDAC4-201ENST00000345617 TMEM50AO95807 157 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 PEX11BO96011 259 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 PRF1P14222 555 aa16.82■□□□□ 0.28
HDAC4-201ENST00000345617 CEACAM21Q3KPI0 293 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 HKR1P10072 659 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 WIPI1Q5MNZ9 446 aaPredicted RBP16.81■□□□□ 0.28
HDAC4-201ENST00000345617 SLC25A10Q9UBX3 287 aaPredicted RBP16.81■□□□□ 0.28
HDAC4-201ENST00000345617 CTAG1AP78358 180 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 SMOC1Q9H4F8 434 aa16.81■□□□□ 0.28
HDAC4-201ENST00000345617 VWA8A3KMH1 1905 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms