RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 IGHV1-69-2A0A0G2JMI3 117 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 SFT2D2O95562 160 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 VSIG8P0DPA2 414 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 DYNLT3P51808 116 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 FXYD6P3P58550 94 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 TAS2R41P59536 307 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 EIF2B1Q14232 305 aaKnown RBP6.12□□□□□ -1.43
ZNF540-202ENST00000343599 GGTLC2Q14390 218 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 HIST3H3Q16695 136 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 KRTAP27-1Q3LI81 207 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 TMEM128Q5BJH2 165 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 C10orf128Q5T292 105 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 ZNF880Q6PDB4 577 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 DNM1P34Q6PK57 102 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 Q6ZWC4 215 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 NIT1Q86X76 327 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 SKA2Q8WVK7 121 aaPredicted RBP6.12□□□□□ -1.43
ZNF540-202ENST00000343599 RNF166Q96A37 237 aaPredicted RBP6.12□□□□□ -1.43
ZNF540-202ENST00000343599 OR10C1Q96KK4 312 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 ARHGDIGQ99819 225 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 YAE1D1Q9NRH1 226 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 CISD1Q9NZ45 108 aaKnown RBP6.12□□□□□ -1.43
ZNF540-202ENST00000343599 DYSFO75923 2080 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 ANKRD17O75179 2603 aaKnown RBP6.12□□□□□ -1.43
ZNF540-202ENST00000343599 CDC42EP2O14613 210 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 HYPMO75409 117 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 DEDDO75618 318 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 RBP4P02753 201 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 ESDP10768 282 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 PNMTP11086 282 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 CNN1P51911 297 aaKnown RBP6.12□□□□□ -1.43
ZNF540-202ENST00000343599 S100A10P60903 97 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 PAFAH1B2P68402 229 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 Q499Y3 187 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 OR4N5Q8IXE1 308 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 C8orf46Q8TAG6 207 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 C16orf92Q96LL3 132 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 OR2V2Q96R30 315 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 ATG10Q9H0Y0 220 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 PGPEP1Q9NXJ5 209 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 KLHL28Q9NXS3 571 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 P2RX2Q9UBL9 471 aa6.12□□□□□ -1.43
ZNF540-202ENST00000343599 TRBV5-7A0A0A0MS05 114 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 CEACAM18A8MTB9 384 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 PRH1P02810 166 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 CTSDP07339 412 aaPredicted RBP6.11□□□□□ -1.43
ZNF540-202ENST00000343599 IGLC2P0DOY2 106 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 IGLC3P0DOY3 106 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 CRYBA4P53673 196 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 SLC17A1Q14916 467 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 VAMP3Q15836 100 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 FAM71F2Q6NXP2 309 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 TMEM144Q7Z5S9 345 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 ZNF417Q8TAU3 575 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 ZNF596Q8TC21 504 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 SETXQ7Z333 2677 aaKnown RBP6.11□□□□□ -1.43
ZNF540-202ENST00000343599 FRYQ5TBA9 3013 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 A0A0J9YW62 118 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 A0A1W2PS29 197 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 MAP1LC3B2A6NCE7 125 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 IGHV3-13P01766 116 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 GNB3P16520 340 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 EGR1P18146 543 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 FUT1P19526 365 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 KITLGP21583 273 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 MSR1P21757 451 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 FABP6P51161 128 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 HNRNPA3P51991 378 aaKnown RBP6.11□□□□□ -1.43
ZNF540-202ENST00000343599 PAX8Q06710 450 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 MZT1Q08AG7 82 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 FAM90A2PQ658T7 463 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 HOGA1Q86XE5 327 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 OR2AJ1Q8NGZ0 328 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 RAB8BQ92930 207 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 MAP1LC3BQ9GZQ8 125 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 OR52D1Q9H346 318 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 SDF2L1Q9HCN8 221 aa6.11□□□□□ -1.43
ZNF540-202ENST00000343599 FAM90A20PA6NIJ5 464 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 TRAPPC6AO75865 159 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 WISP2O76076 250 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 DBIP07108 87 aaKnown RBP6.1□□□□□ -1.43
ZNF540-202ENST00000343599 MSMBP08118 114 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 NHLRC4P0CG21 123 aaPredicted RBP6.1□□□□□ -1.43
ZNF540-202ENST00000343599 BSPH1Q075Z2 132 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 ZNF584Q8IVC4 421 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 PNKDQ8N490 385 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 OR51D1Q8NGF3 324 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 OR52L1Q8NGH7 329 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 OR51G1Q8NGK1 321 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 CLDND2Q8NHS1 167 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 FAM213BQ8TBF2 198 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 FGGYQ96C11 551 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 SLAMF6Q96DU3 332 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 NICN1Q9BSH3 213 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 ZCCHC3Q9NUD5 404 aaKnown RBP6.1□□□□□ -1.43
ZNF540-202ENST00000343599 MED12LQ86YW9 2145 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 DOPEY2Q9Y3R5 2298 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 AHCTF1Q8WYP5 2266 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 IGLC7A0M8Q6 106 aa6.1□□□□□ -1.43
ZNF540-202ENST00000343599 GAGE12BA1L429 117 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms