RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 TRAV1-1A0A0B4J248 108 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 FAM87AP0C7U9 286 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 CCL7P80098 99 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 DNM1P46Q6ZS02 220 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 OPN3Q9H1Y3 402 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-203ENST00000343508 AURKAIP1Q9NWT8 199 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-203ENST00000343508 IFITM10A6NMD0 228 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 A8MWL6 223 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 CORTO00230 105 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 OR2H2O95918 312 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 HBZP02008 142 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 TCL1AP56279 114 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 SOX8P57073 446 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 FNDC7Q5VTL7 733 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 MRPL54Q6P161 138 aaKnown RBP4.11□□□□□ -1.75
CSMD3-203ENST00000343508 ASCL5Q7RTU5 278 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 OR1A1Q9P1Q5 309 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 TRAV38-1A0A0B4J264 116 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 LINC01565O15544 149 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 ORM2P19652 201 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 NRN1LQ496H8 165 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 SLC25A34Q6PIV7 304 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 RNASEH2CQ8TDP1 164 aaKnown RBP4.11□□□□□ -1.75
CSMD3-203ENST00000343508 AGMATQ9BSE5 352 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 GLRX2Q9NS18 164 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 A0A1W2PPE3 182 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 NPBWR2P48146 333 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 SPRED2Q7Z698 418 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 GBGT1Q8N5D6 347 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 CA2P00918 260 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 ACTL10Q5JWF8 245 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 OR1B1Q8NGR6 318 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 PKIBQ9C010 78 aa4.11□□□□□ -1.75
CSMD3-203ENST00000343508 A0A0A6YYD4 124 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 AESQ08117 197 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 FOXL1Q12952 345 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 ABHD3Q8WU67 409 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 TMEM106BQ9NUM4 274 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 DLL3Q9NYJ7 618 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 THSD7BQ9C0I4 1608 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 A8MWP6 167 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 PRR32B1ATL7 298 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 ZG16O60844 167 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 SLC25A53Q5H9E4 307 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 C1orf194Q5T5A4 169 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 MMD2Q8IY49 270 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 IGKV1D-43A0A0B4J1Z2 117 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 SHISA7A6NL88 538 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 IGHV4-34P06331 123 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 PTGDSP41222 190 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 GUSBP11Q6P575 273 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 MISP3Q96FF7 219 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 DEFB127Q9H1M4 99 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 PRRC2BQ5JSZ5 2229 aaKnown RBP4.1□□□□□ -1.75
CSMD3-203ENST00000343508 LOC101059948A0A1B0GTJ6 334 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 hADV38S2A0JD32 116 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 TNFSF15O95150 251 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 NPCDR1Q9BY65 106 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 TNFRSF1AP19438 455 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 LRRC10Q5BKY1 277 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 ERASQ7Z444 233 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 OR10AG1Q8NH19 301 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 CFHR5Q9BXR6 569 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 TINAGQ9UJW2 476 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 PROCRQ9UNN8 238 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 IGHV3-43A0A0B4J1X8 118 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 IGHV3-43DP0DP04 118 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 GZMBP10144 247 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 RTP5Q14D33 572 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 RPP25Q9BUL9 199 aaKnown RBP4.1□□□□□ -1.75
CSMD3-203ENST00000343508 SRIP30626 198 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 SAPCD1Q5SSQ6 148 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 NIT1Q86X76 327 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 OR52L2PQ8NGH6 319 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 UBALD1Q8TB05 177 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 SARAFQ96BY9 339 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 DNAJC4Q9NNZ3 241 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 IGHV1-45A0A0A0MS14 117 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 GRIFINA4D1Z8 144 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 M0R296 226 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 LINC00869P0C866 280 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 SPINK14Q6IE38 97 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 SPEM1Q8N4L4 309 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 OR2Y1Q8NGV0 311 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 IGHV5-10-1A0A0J9YXX1 117 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 S1PR2O95136 353 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 TNFSF10P50591 281 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 QRFPP83859 136 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 TUSC5Q8IXB3 177 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 RFESDQ8TAC1 157 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 MRPL32Q9BYC8 188 aaKnown RBP4.1□□□□□ -1.75
CSMD3-203ENST00000343508 MRPL13Q9BYD1 178 aaKnown RBP4.1□□□□□ -1.75
CSMD3-203ENST00000343508 P2RY6Q15077 328 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 DCAF10Q5QP82 559 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 PAXXQ9BUH6 204 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 THYN1Q9P016 225 aa4.1□□□□□ -1.75
CSMD3-203ENST00000343508 IGHV2-5P01817 119 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 HLA-DRB1P01911 266 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 NXPH1P58417 271 aa4.09□□□□□ -1.75
CSMD3-203ENST00000343508 FLYWCH2Q96CP2 140 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms