RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 TMEM204Q9BSN7 226 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 A0A087X0M5 115 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 TRBV6-7A0A0A0MS04 114 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 A0A1B0GX30 115 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 C12orf77C9JDV5 145 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 C16orf97H3BN30 126 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 CRYGSP22914 178 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 SRSF3P84103 164 aaKnown RBP6.13□□□□□ -1.43
VCAN-202ENST00000342785 C16orf82Q7Z2V1 217 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 BLNKQ8WV28 456 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 FLYWCH2Q96CP2 140 aaKnown RBP6.13□□□□□ -1.43
VCAN-202ENST00000342785 ABHD14AQ9BUJ0 271 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 VAMP8Q9BV40 100 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 IGKV1D-13A0A0B4J2D9 117 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 AHRRA9YTQ3 701 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 RAB29O14966 203 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 MPDU1O75352 247 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 IGKV1-13P0DP09 117 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 ETFRF1Q6IPR1 90 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 ZNF383Q8NA42 475 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 PARD6AQ9NPB6 346 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 TIMM9Q9Y5J7 89 aa6.13□□□□□ -1.43
VCAN-202ENST00000342785 PLXNA3P51805 1871 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 WNT9BO14905 357 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 REG1BP48304 166 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 KLHDC1Q8N7A1 406 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 ZNF645Q8N7E2 425 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 OR1L8Q8NGR8 309 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 FGFBP3Q8TAT2 258 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 NOL4LQ96MY1 436 aaPredicted RBP6.12□□□□□ -1.43
VCAN-202ENST00000342785 PXMP4Q9Y6I8 212 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 HELTA6NFD8 242 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 CXorf1O96002 111 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 FTH1P19P0C7X4 201 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 ZFP36L1Q07352 338 aaKnown RBP6.12□□□□□ -1.43
VCAN-202ENST00000342785 TNXAQ16473 311 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 MIC13Q5XKP0 118 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 ZNF343Q6P1L6 599 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 C1orf174Q8IYL3 243 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 BCL2L2Q92843 193 aaPredicted RBP6.12□□□□□ -1.43
VCAN-202ENST00000342785 P2RX4Q99571 388 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 PPP1R14DQ9NXH3 145 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 SEMA5BQ9P283 1151 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 FOXD3Q9UJU5 478 aaPredicted RBP6.12□□□□□ -1.43
VCAN-202ENST00000342785 SSTR5P35346 364 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 PTGDSP41222 190 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 FAM3BP58499 235 aaPredicted RBP6.12□□□□□ -1.43
VCAN-202ENST00000342785 MRPL54Q6P161 138 aaKnown RBP6.12□□□□□ -1.43
VCAN-202ENST00000342785 OR1L4Q8NGR5 311 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 NABP1Q96AH0 204 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 ACACBO00763 2458 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 MTCL1Q9Y4B5 1905 aaKnown RBP6.12□□□□□ -1.43
VCAN-202ENST00000342785 DIDO1Q9BTC0 2240 aaKnown RBP6.12□□□□□ -1.43
VCAN-202ENST00000342785 TGIF2-C20orf24A0A0A6YYL0 155 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 CXorf65A6NEN9 183 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 MMP7P09237 267 aaPredicted RBP6.12□□□□□ -1.43
VCAN-202ENST00000342785 ACP1P24666 158 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 OR10J1P30954 320 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 FOXG1P55316 489 aaPredicted RBP6.12□□□□□ -1.43
VCAN-202ENST00000342785 RPEL1Q2QD12 228 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 ZNF506Q5JVG8 444 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 WDR73Q6P4I2 378 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 RTN4RL2Q86UN3 420 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 ZNF524Q96C55 264 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 PSMG3Q9BT73 122 aaPredicted RBP6.12□□□□□ -1.43
VCAN-202ENST00000342785 MS4A5Q9H3V2 200 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 SEBOXQ9HB31 216 aaPredicted RBP6.12□□□□□ -1.43
VCAN-202ENST00000342785 ATRXP46100 2492 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 WISP1O95388 367 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 AARDQ4LEZ3 155 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 Q6ZT83 130 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 OR2T6Q8NHC8 308 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 PCGF1Q9BSM1 259 aa6.12□□□□□ -1.43
VCAN-202ENST00000342785 SNRPCP09234 159 aaKnown RBP6.11□□□□□ -1.43
VCAN-202ENST00000342785 WDR25Q64LD2 544 aaPredicted RBP6.11□□□□□ -1.43
VCAN-202ENST00000342785 CALYQ9NYX4 217 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 TP53BP1Q12888 1972 aaPredicted RBP6.11□□□□□ -1.43
VCAN-202ENST00000342785 LRRC3CA6NJW4 275 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 FAM90A27PA6NNH2 459 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 SP9P0CG40 484 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 RANP62826 216 aaKnown RBP6.11□□□□□ -1.43
VCAN-202ENST00000342785 COX19Q49B96 90 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 RNF2Q99496 336 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 TXNDC17Q9BRA2 123 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 REG4Q9BYZ8 158 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 GP6Q9HCN6 339 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 TCF19Q9Y242 345 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 TMEM56-RWDD3S4R434 201 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 PQLC2LA1A4F0 135 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 CCKARP32238 428 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 IER3P46695 156 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 PSG7Q13046 419 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 OR4X1Q8NH49 305 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 SRD5A3Q9H8P0 318 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 PHF3Q92576 2039 aaKnown RBP6.11□□□□□ -1.43
VCAN-202ENST00000342785 SRSF10O75494 262 aaKnown RBP6.11□□□□□ -1.43
VCAN-202ENST00000342785 SRP19P09132 144 aaKnown RBP6.11□□□□□ -1.43
VCAN-202ENST00000342785 PRRX1P54821 245 aa6.11□□□□□ -1.43
VCAN-202ENST00000342785 HSPE1P61604 102 aaKnown RBP6.11□□□□□ -1.43
VCAN-202ENST00000342785 QRFPP83859 136 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms