RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 M0R143 59 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 CCL1P22362 96 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 HOXA6P31267 233 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 COL10A1Q03692 680 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 TNFRSF9Q07011 255 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 TRA2AQ13595 282 aaKnown RBP eCLIP10.58□□□□□ -0.725e-6■□□□□ 11.3
SNRNP48-201ENST00000342415 HEPN1Q6WQI6 88 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 SSX7Q7RTT5 188 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 NDUFA2O43678 99 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 STUMQ69YW2 141 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 FAM216AQ8WUB2 273 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 NABP1Q96AH0 204 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 SRD5A3Q9H8P0 318 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 DNPH1O43598 174 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 PAX5Q02548 391 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 SRSF4Q08170 494 aaKnown RBP10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 RIPPLY2Q5TAB7 128 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 DEFB124Q8NES8 71 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 OR10X1Q8NGY0 326 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 RAB9BQ9NP90 201 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 FOXD3Q9UJU5 478 aaPredicted RBP10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 PROCRQ9UNN8 238 aa10.58□□□□□ -0.72
SNRNP48-201ENST00000342415 THADAQ6YHU6 1953 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 FGF5P12034 268 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 PTGDSP41222 190 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 TFF3Q07654 80 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 ATP6V1FQ16864 119 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 WFDC8Q8IUA0 241 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 FADS6Q8N9I5 356 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 SGK494Q96LW2 274 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 HRASP01112 189 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 IGLV3-19P01714 112 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 SOD3P08294 240 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 REG1BP48304 166 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 TGIF2LXQ8IUE1 241 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 HSPB9Q9BQS6 159 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 MANBALQ9NQG1 85 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 OOEPA6NGQ2 149 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 AGAP20933 346 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 RNASEKQ6P5S7 137 aaKnown RBP10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 ZNF600Q6ZNG1 722 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 MOGAT3Q86VF5 341 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 IMMP2LQ96T52 175 aa10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 WDR61Q9GZS3 305 aaKnown RBP10.57□□□□□ -0.72
SNRNP48-201ENST00000342415 PCNX2A6NKB5 2137 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 ZNF729A6NN14 1252 aaPredicted RBP10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 C1QTNF9BB2RNN3 333 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 FXYD3Q14802 87 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 PMS2CLQ68D20 193 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 NHLRC2Q8NBF2 726 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 IMMP1LQ96LU5 166 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 DEPPQ9NTK1 212 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 IGLV3-12A0A075B6K2 115 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 IGHV3-21A0A0B4J1V1 117 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 RHOBP62745 196 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 OR5I1Q13606 314 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 TRAT1Q6PIZ9 186 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 OR4D5Q8NGN0 318 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 TRGV10A0A0A0MS01 117 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 PLAUP00749 431 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 LINC00205P59089 165 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 TAS2R45P59539 299 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 MRPL14Q6P1L8 145 aaKnown RBP10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 PPP1R32Q7Z5V6 425 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 OR1L6Q8NGR2 347 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 ANAPC16Q96DE5 110 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 WBP1Q96G27 269 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 PRDM14Q9GZV8 571 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 DECR2Q9NUI1 292 aa10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 CISD1Q9NZ45 108 aaKnown RBP10.56□□□□□ -0.72
SNRNP48-201ENST00000342415 COX7A2P2O60397 106 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 CELA3BP08861 270 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 ORM2P19652 201 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 CD33P20138 364 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 OPRK1P41145 380 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 WNT5AP41221 380 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 HNRNPA3P51991 378 aaKnown RBP10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 SLC25A53Q5H9E4 307 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 CISD2Q8N5K1 135 aaKnown RBP10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 OR4X1Q8NH49 305 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 SARAFQ96BY9 339 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 TUBA4BQ9H853 241 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 PXMP4Q9Y6I8 212 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 ODAMA1E959 279 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 C17orf98A8MV24 154 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 CBLN1P23435 193 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 MRPS11P82912 194 aaKnown RBP10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 ERHP84090 104 aaKnown RBP10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 ID3Q02535 119 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 VAMP3Q15836 100 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 GCSAMLQ5JQS6 135 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 POM121L2Q96KW2 1035 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 REPIN1Q9BWE0 567 aaKnown RBP10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 A0A0G2JRQ6 117 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 MARCH11A6NNE9 402 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 SLC17A3O00476 420 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 RAMP3O60896 148 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 CLDN14O95500 239 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 RTL8BQ17RB0 113 aa10.55□□□□□ -0.72
SNRNP48-201ENST00000342415 OR5AU1Q8NGC0 362 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms