RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 SMIM19Q96E16 107 aa12.59□□□□□ -0.39
TRA2B-202ENST00000342294 FAAP24Q9BTP7 215 aa12.59□□□□□ -0.39
TRA2B-202ENST00000342294 CKLFQ9UBR5 152 aa12.59□□□□□ -0.39
TRA2B-202ENST00000342294 TRBV5-7A0A0A0MS05 114 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 TRBV9A0A0B4J1U6 114 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 FAM223BA6NKX1 122 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 OR9G9P0C7N8 305 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 RHOGP84095 191 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 PRR20EP86478 221 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 PRR20CP86479 221 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 PRR20DP86480 221 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 PRR20BP86481 221 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 PRR20AP86496 221 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 EXOSC2Q13868 293 aaKnown RBP12.58□□□□□ -0.4
TRA2B-202ENST00000342294 ZIK1Q3SY52 487 aaPredicted RBP12.58□□□□□ -0.4
TRA2B-202ENST00000342294 Q499Y3 187 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 FAM223AQ8IWN6 122 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 TMEM61Q8N0U2 210 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 KCNG3Q8TAE7 436 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 PHLDA1Q8WV24 401 aaPredicted RBP12.58□□□□□ -0.4
TRA2B-202ENST00000342294 EDARADDQ8WWZ3 215 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 OR1A1Q9P1Q5 309 aa12.58□□□□□ -0.4
TRA2B-202ENST00000342294 LGALS9O00182 355 aa12.57□□□□□ -0.4
TRA2B-202ENST00000342294 ATP8B1O43520 1251 aa12.57□□□□□ -0.4
TRA2B-202ENST00000342294 SPRY2O43597 315 aa12.57□□□□□ -0.4
TRA2B-202ENST00000342294 APOA2P02652 100 aa12.57□□□□□ -0.4
TRA2B-202ENST00000342294 APELAP0DMC3 54 aa12.57□□□□□ -0.4
TRA2B-202ENST00000342294 CEACAM6P40199 344 aa12.57□□□□□ -0.4
TRA2B-202ENST00000342294 ZNF45Q02386 682 aa12.57□□□□□ -0.4
TRA2B-202ENST00000342294 ATP5G2Q06055 141 aa12.57□□□□□ -0.4
TRA2B-202ENST00000342294 OR2G6Q5TZ20 316 aa12.57□□□□□ -0.4
TRA2B-202ENST00000342294 C6orf201Q7Z4U5 140 aa12.57□□□□□ -0.4
TRA2B-202ENST00000342294 Q96MT0 163 aa12.57□□□□□ -0.4
TRA2B-202ENST00000342294 NEDD4LQ96PU5 975 aa12.57□□□□□ -0.4
TRA2B-202ENST00000342294 FGF20Q9NP95 211 aaPredicted RBP12.57□□□□□ -0.4
TRA2B-202ENST00000342294 LALBAP00709 142 aa12.56□□□□□ -0.4
TRA2B-202ENST00000342294 CBLN1P23435 193 aa12.56□□□□□ -0.4
TRA2B-202ENST00000342294 ETV1P50549 477 aa12.56□□□□□ -0.4
TRA2B-202ENST00000342294 OR52B4Q8NGK2 314 aa12.56□□□□□ -0.4
TRA2B-202ENST00000342294 SLC35D1Q9NTN3 355 aa12.56□□□□□ -0.4
TRA2B-202ENST00000342294 BABAM2Q9NXR7 383 aa12.56□□□□□ -0.4
TRA2B-202ENST00000342294 GHRLQ9UBU3 117 aa12.56□□□□□ -0.4
TRA2B-202ENST00000342294 SELENOKQ9Y6D0 94 aa12.56□□□□□ -0.4
TRA2B-202ENST00000342294 TRBV6-6A0A0A6YYG2 114 aa12.55□□□□□ -0.4
TRA2B-202ENST00000342294 A0A1W2PPK0 400 aa12.55□□□□□ -0.4
TRA2B-202ENST00000342294 SRRM4A7MD48 611 aaKnown RBP12.55□□□□□ -0.4
TRA2B-202ENST00000342294 EI24O14681 340 aa12.55□□□□□ -0.4
TRA2B-202ENST00000342294 PRH1P02810 166 aa12.55□□□□□ -0.4
TRA2B-202ENST00000342294 ZBTB25P24278 435 aa12.55□□□□□ -0.4
TRA2B-202ENST00000342294 YIF1BQ5BJH7 314 aa12.55□□□□□ -0.4
TRA2B-202ENST00000342294 MOB1BQ7L9L4 216 aa12.55□□□□□ -0.4
TRA2B-202ENST00000342294 CACNG8Q8WXS5 425 aa12.55□□□□□ -0.4
TRA2B-202ENST00000342294 ZNF221Q9UK13 617 aa12.55□□□□□ -0.4
TRA2B-202ENST00000342294 RPL36Q9Y3U8 105 aaKnown RBP12.55□□□□□ -0.4
TRA2B-202ENST00000342294 ORC6Q9Y5N6 252 aa12.55□□□□□ -0.4
TRA2B-202ENST00000342294 PPP5D1E7EU14 171 aa12.54□□□□□ -0.4
TRA2B-202ENST00000342294 TUSC2O75896 110 aa12.54□□□□□ -0.4
TRA2B-202ENST00000342294 OR2C1O95371 312 aa12.54□□□□□ -0.4
TRA2B-202ENST00000342294 HLA-AP01891 365 aaKnown RBP12.54□□□□□ -0.4
TRA2B-202ENST00000342294 DEFB135Q30KP9 77 aa12.54□□□□□ -0.4
TRA2B-202ENST00000342294 ZNF57Q68EA5 555 aaPredicted RBP12.54□□□□□ -0.4
TRA2B-202ENST00000342294 TMPRSS11AQ6ZMR5 421 aa12.54□□□□□ -0.4
TRA2B-202ENST00000342294 GPHB5Q86YW7 130 aa12.54□□□□□ -0.4
TRA2B-202ENST00000342294 THRSPQ92748 146 aa12.54□□□□□ -0.4
TRA2B-202ENST00000342294 PGLYRP3Q96LB9 341 aa12.54□□□□□ -0.4
TRA2B-202ENST00000342294 PHB2Q99623 299 aa12.54□□□□□ -0.4
TRA2B-202ENST00000342294 UQCC2Q9BRT2 126 aa12.54□□□□□ -0.4
TRA2B-202ENST00000342294 MLXQ9UH92 298 aa12.54□□□□□ -0.4
TRA2B-202ENST00000342294 TMEM213A2RRL7 107 aa12.53□□□□□ -0.4
TRA2B-202ENST00000342294 M0R1X1 148 aa12.53□□□□□ -0.4
TRA2B-202ENST00000342294 GGCTO75223 188 aaKnown RBP12.53□□□□□ -0.4
TRA2B-202ENST00000342294 HTR2CP28335 458 aa12.53□□□□□ -0.4
TRA2B-202ENST00000342294 RPS27AP62979 156 aaKnown RBP12.53□□□□□ -0.4
TRA2B-202ENST00000342294 ANKRD55Q3KP44 614 aa12.53□□□□□ -0.4
TRA2B-202ENST00000342294 TM4SF20Q53R12 229 aa12.53□□□□□ -0.4
TRA2B-202ENST00000342294 TMEM177Q53S58 311 aa12.53□□□□□ -0.4
TRA2B-202ENST00000342294 FAM209BQ5JX69 171 aa12.53□□□□□ -0.4
TRA2B-202ENST00000342294 TMEM217Q8N7C4 229 aa12.53□□□□□ -0.4
TRA2B-202ENST00000342294 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.53□□□□□ -0.4
TRA2B-202ENST00000342294 NECAP1Q8NC96 275 aa12.53□□□□□ -0.4
TRA2B-202ENST00000342294 SETD6Q8TBK2 473 aa12.53□□□□□ -0.4
TRA2B-202ENST00000342294 APH1BQ8WW43 257 aa12.53□□□□□ -0.4
TRA2B-202ENST00000342294 RNF183Q96D59 192 aa12.53□□□□□ -0.4
TRA2B-202ENST00000342294 HARBI1Q96MB7 349 aa12.53□□□□□ -0.4
TRA2B-202ENST00000342294 SLC29A1Q99808 456 aa12.53□□□□□ -0.4
TRA2B-202ENST00000342294 CHMP1AQ9HD42 196 aaPredicted RBP12.53□□□□□ -0.4
TRA2B-202ENST00000342294 VPS13DQ5THJ4 4388 aa12.53□□□□□ -0.4
TRA2B-202ENST00000342294 UBE2CO00762 179 aa12.52□□□□□ -0.41
TRA2B-202ENST00000342294 SCAF4O95104 1147 aaKnown RBP12.52□□□□□ -0.41
TRA2B-202ENST00000342294 SCTP09683 121 aa12.52□□□□□ -0.41
TRA2B-202ENST00000342294 MED14OSP0DP75 135 aa12.52□□□□□ -0.41
TRA2B-202ENST00000342294 DCKP27707 260 aa12.52□□□□□ -0.41
TRA2B-202ENST00000342294 APOC4P55056 127 aa12.52□□□□□ -0.41
TRA2B-202ENST00000342294 HLA-DRB3P79483 266 aa12.52□□□□□ -0.41
TRA2B-202ENST00000342294 PRSS8Q16651 343 aa12.52□□□□□ -0.41
TRA2B-202ENST00000342294 OR10K2Q6IF99 312 aa12.52□□□□□ -0.41
TRA2B-202ENST00000342294 SRSF12Q8WXF0 261 aaKnown RBP12.52□□□□□ -0.41
TRA2B-202ENST00000342294 RIMS4Q9H426 269 aaPredicted RBP12.52□□□□□ -0.41
TRA2B-202ENST00000342294 IGKV1-6A0A0C4DH72 117 aa12.51□□□□□ -0.41
TRA2B-202ENST00000342294 A0A1B0GVY2 172 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms