RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 MRPL37Q9BZE1 423 aaKnown RBP12.16□□□□□ -0.46
TDP2-201ENST00000341060 SDF2L1Q9HCN8 221 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 PLSCR4Q9NRQ2 329 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 METRNQ9UJH8 293 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 FZR1Q9UM11 496 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 DSCAML1Q8TD84 2053 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 AKAP13Q12802 2813 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 TRAV17A0A0B4J275 112 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 OR5H1A6NKK0 313 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 LINC00473A8K010 186 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 CEBPZOSA8MTT3 80 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 ZG16O60844 167 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 CD55P08174 381 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 GCH1P30793 250 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 FOXF2Q12947 444 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 ZNF674Q2M3X9 581 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 TPRX1Q8N7U7 411 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 LHX4Q969G2 390 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 CIB3Q96Q77 187 aaPredicted RBP12.16□□□□□ -0.46
TDP2-201ENST00000341060 TAAR6Q96RI8 345 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 HSD17B10Q99714 261 aaKnown RBP12.16□□□□□ -0.46
TDP2-201ENST00000341060 AGMATQ9BSE5 352 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 SLC39A9Q9NUM3 307 aa12.16□□□□□ -0.46
TDP2-201ENST00000341060 IGHV2OR16-5A0A0B4J2B6 119 aa12.15□□□□□ -0.46
TDP2-201ENST00000341060 CYB5BO43169 146 aa12.15□□□□□ -0.46
TDP2-201ENST00000341060 ZNF737O75373 536 aa12.15□□□□□ -0.46
TDP2-201ENST00000341060 RND2P52198 227 aa12.15□□□□□ -0.46
TDP2-201ENST00000341060 NCMAPQ5T1S8 102 aa12.15□□□□□ -0.46
TDP2-201ENST00000341060 ACSM6Q6P461 480 aa12.15□□□□□ -0.46
TDP2-201ENST00000341060 TRAT1Q6PIZ9 186 aa12.15□□□□□ -0.46
TDP2-201ENST00000341060 FAM180AQ6UWF9 173 aa12.15□□□□□ -0.46
TDP2-201ENST00000341060 H2BFWTQ7Z2G1 175 aa12.15□□□□□ -0.46
TDP2-201ENST00000341060 ZNF610Q8N9Z0 462 aa12.15□□□□□ -0.46
TDP2-201ENST00000341060 OR10P1Q8NGE3 313 aa12.15□□□□□ -0.46
TDP2-201ENST00000341060 OR13D1Q8NGV5 346 aa12.15□□□□□ -0.46
TDP2-201ENST00000341060 TMPRSS5Q9H3S3 457 aa12.15□□□□□ -0.46
TDP2-201ENST00000341060 IGHV3-43A0A0B4J1X8 118 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 MARCH11A6NNE9 402 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 CLDN34H7C241 214 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 ADH4P08319 380 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 IGHV3-43DP0DP04 118 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 HOXA5P20719 270 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 HTD2P86397 168 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 MEF2BQ02080 365 aaPredicted RBP12.14□□□□□ -0.47
TDP2-201ENST00000341060 NHLH1Q02575 133 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 WDR25Q64LD2 544 aaPredicted RBP12.14□□□□□ -0.47
TDP2-201ENST00000341060 C1orf174Q8IYL3 243 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 ZDHHC16Q969W1 377 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 NIT2Q9NQR4 276 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 TANC2Q9HCD6 1990 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 IGHV1-18A0A0C4DH31 117 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 CTXND1A0A1B0GTU2 59 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 C15orf65H3BRN8 121 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 SPINT2O43291 252 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 MBP02144 154 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 CD81P60033 236 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 VWC2Q2TAL6 325 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 Q3ZCU0 254 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 TET2Q6N021 2002 aaPredicted RBP12.14□□□□□ -0.47
TDP2-201ENST00000341060 BEND4Q6ZU67 534 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 C1orf87Q8N0U7 546 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 CD177Q8N6Q3 437 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 ASCL3Q9NQ33 180 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 DOK5Q9P104 306 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 PSG11Q9UQ72 335 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 SVILO95425 2214 aa12.14□□□□□ -0.47
TDP2-201ENST00000341060 ST8SIA5O15466 376 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 TNFSF13O75888 250 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 FGF7P21781 194 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 MZT1Q08AG7 82 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 RFESDQ8TAC1 157 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 LRRC29Q8WV35 223 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 NPCDR1Q9BY65 106 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 ZNF71Q9NQZ8 489 aaPredicted RBP12.13□□□□□ -0.47
TDP2-201ENST00000341060 DLL1O00548 723 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 HIST1H2BKO60814 126 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 HIST1H2BJP06899 126 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 HIST1H2BOP23527 126 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 HIST1H2BBP33778 126 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 CDX1P47902 265 aaPredicted RBP12.13□□□□□ -0.47
TDP2-201ENST00000341060 HIST1H2BDP58876 126 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 HIST1H2BCP62807 126 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 HNF4GQ14541 408 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 HIST2H2BEQ16778 126 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.13□□□□□ -0.47
TDP2-201ENST00000341060 EDARADDQ8WWZ3 215 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 HIST1H2BHQ93079 126 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 HIST1H2BNQ99877 126 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 HIST1H2BMQ99879 126 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 SLC25A22Q9H936 323 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 GSN-AS1Q9NRJ2 163 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 DKK4Q9UBT3 224 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 WASF3Q9UPY6 502 aa12.13□□□□□ -0.47
TDP2-201ENST00000341060 DEFB108AA8MXU0 73 aa12.12□□□□□ -0.47
TDP2-201ENST00000341060 AHRRA9YTQ3 701 aa12.12□□□□□ -0.47
TDP2-201ENST00000341060 RBMXL2O75526 392 aaKnown RBP12.12□□□□□ -0.47
TDP2-201ENST00000341060 YIF1AO95070 293 aa12.12□□□□□ -0.47
TDP2-201ENST00000341060 CGAP01215 116 aa12.12□□□□□ -0.47
TDP2-201ENST00000341060 FABP1P07148 127 aa12.12□□□□□ -0.47
TDP2-201ENST00000341060 WT1P19544 449 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms