RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 STUMQ69YW2 141 aa13.18□□□□□ -0.3
CCDC144A-202ENST00000340621 TMEM14EPQ6UXP3 125 aa13.18□□□□□ -0.3
CCDC144A-202ENST00000340621 ETV3LQ6ZN32 361 aa13.18□□□□□ -0.3
CCDC144A-202ENST00000340621 ZCCHC24Q8N2G6 241 aaKnown RBP13.18□□□□□ -0.3
CCDC144A-202ENST00000340621 SFT2D1Q8WV19 159 aa13.18□□□□□ -0.3
CCDC144A-202ENST00000340621 LEAP2Q969E1 77 aa13.18□□□□□ -0.3
CCDC144A-202ENST00000340621 OR4C12Q96R67 309 aa13.18□□□□□ -0.3
CCDC144A-202ENST00000340621 USF3Q68DE3 2245 aa13.18□□□□□ -0.3
CCDC144A-202ENST00000340621 FAM87AP0C7U9 286 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 TNFSF4P23510 183 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 BSPH1Q075Z2 132 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 ADIPOQQ15848 244 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 RPL39P5Q59GN2 51 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 LILRB2Q8N423 598 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 ZDHHC16Q969W1 377 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 CCL13Q99616 98 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 SLC35B3Q9H1N7 401 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 RBFOX3A6NFN3 312 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 MARCH11A6NNE9 402 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 SLC31A2O15432 143 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 FCGR3BO75015 233 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 GYPAP02724 150 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 CD55P08174 381 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 OR4A8P0C604 315 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 LRRC75BQ2VPJ9 315 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 OR8G2PQ6IF36 304 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 C1orf229Q6ZS94 237 aaPredicted RBP13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 Q8TCH9 128 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 IFI27L2Q9H2X8 130 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 LAMP3Q9UQV4 416 aa13.17□□□□□ -0.3
CCDC144A-202ENST00000340621 M0R1X1 148 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 ZG16O60844 167 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 RBMXL2O75526 392 aaKnown RBP13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 OR13C7P0DN81 318 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 TLE4Q04727 773 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 AKIRIN2Q53H80 203 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 CD300LFQ8TDQ1 290 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 GAFA1Q96PS6 74 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 FAM234AQ9H0X4 552 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 NCOR1P1Q9H4R4 102 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 VSIRQ9H7M9 311 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 PLCE1Q9P212 2302 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 KBTBD11-OT1A0A1B0GTJ5 212 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 A0A1W2PPE3 182 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 BTBD17A6NE02 478 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 ATXN7O15265 892 aaPredicted RBP13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 PPIHO43447 177 aaKnown RBP13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 SLC38A11Q08AI6 406 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 SPINK9Q5DT21 86 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 FAM216BQ8N7L0 139 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 DTD1Q8TEA8 209 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 R3HDM4Q96D70 268 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 RPRMQ9NS64 109 aa13.16□□□□□ -0.3
CCDC144A-202ENST00000340621 DIDO1Q9BTC0 2240 aaKnown RBP13.15□□□□□ -0.3
CCDC144A-202ENST00000340621 AKR1C3P42330 323 aa13.15□□□□□ -0.3
CCDC144A-202ENST00000340621 HAGHQ16775 308 aa13.15□□□□□ -0.3
CCDC144A-202ENST00000340621 DPPA3Q6W0C5 159 aa13.15□□□□□ -0.3
CCDC144A-202ENST00000340621 WDR61Q9GZS3 305 aaKnown RBP13.15□□□□□ -0.3
CCDC144A-202ENST00000340621 HIPK2Q9H2X6 1198 aa13.15□□□□□ -0.3
CCDC144A-202ENST00000340621 OR9G9P0C7N8 305 aa13.15□□□□□ -0.31
CCDC144A-202ENST00000340621 RPS16P62249 146 aaKnown RBP13.15□□□□□ -0.31
CCDC144A-202ENST00000340621 CT45A1Q5HYN5 189 aa13.15□□□□□ -0.31
CCDC144A-202ENST00000340621 ZNF788Q6ZQV5 615 aa13.15□□□□□ -0.31
CCDC144A-202ENST00000340621 CT45A3Q8NHU0 189 aa13.15□□□□□ -0.31
CCDC144A-202ENST00000340621 AIFM2Q9BRQ8 373 aa13.15□□□□□ -0.31
CCDC144A-202ENST00000340621 QTRT1Q9BXR0 403 aaKnown RBP13.15□□□□□ -0.31
CCDC144A-202ENST00000340621 KIAA1456Q9P272 454 aa13.15□□□□□ -0.31
CCDC144A-202ENST00000340621 ZGRF1Q86YA3 2104 aa13.14□□□□□ -0.31
CCDC144A-202ENST00000340621 TRGV10A0A0A0MS01 117 aa13.14□□□□□ -0.31
CCDC144A-202ENST00000340621 HPRT1P00492 218 aa13.14□□□□□ -0.31
CCDC144A-202ENST00000340621 OR8U8P0C7N1 319 aa13.14□□□□□ -0.31
CCDC144A-202ENST00000340621 IRF2P14316 349 aa13.14□□□□□ -0.31
CCDC144A-202ENST00000340621 HFEQ30201 348 aa13.14□□□□□ -0.31
CCDC144A-202ENST00000340621 ADAM5Q6NVV9 412 aa13.14□□□□□ -0.31
CCDC144A-202ENST00000340621 SSX9Q7RTT3 188 aa13.14□□□□□ -0.31
CCDC144A-202ENST00000340621 TCF23Q7RTU1 214 aa13.14□□□□□ -0.31
CCDC144A-202ENST00000340621 VKORC1L1Q8N0U8 176 aa13.14□□□□□ -0.31
CCDC144A-202ENST00000340621 TAF15Q92804 592 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCDC144A-202ENST00000340621 WFIKKN1Q96NZ8 548 aa13.14□□□□□ -0.31
CCDC144A-202ENST00000340621 PSMG3Q9BT73 122 aaPredicted RBP13.14□□□□□ -0.31
CCDC144A-202ENST00000340621 ZNF665Q9H7R5 613 aa13.14□□□□□ -0.31
CCDC144A-202ENST00000340621 GFOD1Q9NXC2 390 aa13.14□□□□□ -0.31
CCDC144A-202ENST00000340621 UBE2L5PA0A1B0GUS4 154 aa13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 PMS2P5A8MQ11 134 aa13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 C17orf100A8MU93 164 aa13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 TEX36Q5VZQ5 186 aa13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 FAM216AQ8WUB2 273 aa13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 C20orf24Q9BUV8 137 aa13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 SMDT1Q9H4I9 107 aa13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 NDRG3Q9UGV2 375 aa13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 CEBPZOSA8MTT3 80 aa13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 OR2B8PP59922 312 aa13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 HNF4GQ14541 408 aa13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 ZNF726P1Q15940 193 aa13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 AWAT1Q58HT5 328 aa13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 PARD6GQ9BYG4 376 aaPredicted RBP13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 RPS10P5Q9NQ39 176 aa13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 MSRB2Q9Y3D2 182 aa13.13□□□□□ -0.31
CCDC144A-202ENST00000340621 TRAV1-1A0A0B4J248 108 aa13.12□□□□□ -0.31
CCDC144A-202ENST00000340621 SNRNP70P08621 437 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms