RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 MOB1AQ9H8S9 216 aa12.76□□□□□ -0.37
BRAT1-201ENST00000340611 Q9UFV3 132 aa12.76□□□□□ -0.37
BRAT1-201ENST00000340611 TRDCB7Z8K6 153 aa12.76□□□□□ -0.37
BRAT1-201ENST00000340611 CDC34P49427 236 aaPredicted RBP12.76□□□□□ -0.37
BRAT1-201ENST00000340611 UBE2NP61088 152 aaKnown RBP12.76□□□□□ -0.37
BRAT1-201ENST00000340611 FAM27E3Q08E93 113 aa12.76□□□□□ -0.37
BRAT1-201ENST00000340611 ADIRFQ15847 76 aa12.76□□□□□ -0.37
BRAT1-201ENST00000340611 FAM89BQ8N5H3 189 aa12.76□□□□□ -0.37
BRAT1-201ENST00000340611 POM121L2Q96KW2 1035 aa12.76□□□□□ -0.37
BRAT1-201ENST00000340611 RNF2Q99496 336 aa12.76□□□□□ -0.37
BRAT1-201ENST00000340611 YLPM1P49750 1951 aaKnown RBP12.76□□□□□ -0.37
BRAT1-201ENST00000340611 A0A1B0GU03 582 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 K7EP13 123 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 RIPPLY3P57055 190 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 UBE2V1Q13404 147 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 DPPA3Q6W0C5 159 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 DOK3Q7L591 496 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 OR5L1Q8NGL2 311 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 PLEKHJ1Q9NW61 149 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 TRBV24-1A0A075B6N3 115 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 C3orf80F5H4A9 247 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 MSTNO14793 375 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 LILRA1O75019 489 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 CTSDP07339 412 aaPredicted RBP12.75□□□□□ -0.37
BRAT1-201ENST00000340611 FGF8P55075 233 aaPredicted RBP12.75□□□□□ -0.37
BRAT1-201ENST00000340611 CRIP3Q6Q6R5 217 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 ZNF709Q8N972 641 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 SLC24A4Q8NFF2 622 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 DYRK2Q92630 601 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 PRORYQ9H606 182 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 TRGV8A0A0C4DH27 118 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 DHRS3O75911 302 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 OPN1MWP04001 364 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 OPN1MW2P0DN77 364 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 OPN1MW3P0DN78 364 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 TGFBR3Q03167 851 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 PLP2Q04941 152 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 KRTAP27-1Q3LI81 207 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 BRICD5Q6PL45 260 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 WDR31Q8NA23 367 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 VAMP8Q9BV40 100 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 SLC7A11Q9UPY5 501 aa12.75□□□□□ -0.37
BRAT1-201ENST00000340611 SPTAN1Q13813 2472 aaKnown RBP12.74□□□□□ -0.37
BRAT1-201ENST00000340611 KIAA2026Q5HYC2 2103 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 IGHV3-64DA0A0J9YX35 117 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 ZNF850A8MQ14 1090 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 FOXI3A8MTJ6 420 aaPredicted RBP12.74□□□□□ -0.37
BRAT1-201ENST00000340611 GOSR1O95249 250 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 IGLV3-1P01715 115 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 RPL19P84098 196 aaKnown RBP12.74□□□□□ -0.37
BRAT1-201ENST00000340611 PCSK4Q6UW60 755 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 FBXW12Q6X9E4 464 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 C16orf82Q7Z2V1 217 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 WFDC8Q8IUA0 241 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 RNF115Q9Y4L5 304 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 PKDREJQ9NTG1 2253 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 ATP6V0CP27449 155 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 ARR3P36575 388 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 HINT1P49773 126 aaPredicted RBP12.74□□□□□ -0.37
BRAT1-201ENST00000340611 RND2P52198 227 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 MRPL49Q13405 166 aaKnown RBP12.74□□□□□ -0.37
BRAT1-201ENST00000340611 NRN1LQ496H8 165 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 ABCA11PQ4W5N1 156 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 OR5T1Q8NG75 326 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 RTN4IP1Q8WWV3 396 aaPredicted RBP12.74□□□□□ -0.37
BRAT1-201ENST00000340611 AURKAIP1Q9NWT8 199 aaPredicted RBP12.74□□□□□ -0.37
BRAT1-201ENST00000340611 FZR1Q9UM11 496 aa12.74□□□□□ -0.37
BRAT1-201ENST00000340611 A0A0U1RQV5 110 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 A0A1W2PN81 502 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 CCL1P22362 96 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 CHRNA7P36544 502 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 CDKN1AP38936 164 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 RUNX1Q01196 453 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 KLRB1Q12918 225 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 OR11L1Q8NGX0 322 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 SERPINE3A8MV23 424 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 F6UZH7 168 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 ANGPTL7O43827 346 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 COX5AP20674 150 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 TMEM187Q14656 261 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 PIGCQ92535 297 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 C1QTNF5Q9BXJ0 243 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 KIAA1456Q9P272 454 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 DOCK11Q5JSL3 2073 aa12.73□□□□□ -0.37
BRAT1-201ENST00000340611 FAM230AA0A1W2PPH8 454 aa12.72□□□□□ -0.37
BRAT1-201ENST00000340611 FAM24AA6NFZ4 105 aa12.72□□□□□ -0.37
BRAT1-201ENST00000340611 ZNF728P0DKX0 622 aa12.72□□□□□ -0.37
BRAT1-201ENST00000340611 MEX3BQ6ZN04 569 aaKnown RBP12.72□□□□□ -0.37
BRAT1-201ENST00000340611 SSC4DQ8WTU2 575 aa12.72□□□□□ -0.37
BRAT1-201ENST00000340611 ANXA10Q9UJ72 324 aa12.72□□□□□ -0.37
BRAT1-201ENST00000340611 TIMP3P35625 211 aa12.72□□□□□ -0.37
BRAT1-201ENST00000340611 COA6Q5JTJ3 125 aaKnown RBP12.72□□□□□ -0.37
BRAT1-201ENST00000340611 BHLHA15Q7RTS1 189 aaPredicted RBP12.72□□□□□ -0.37
BRAT1-201ENST00000340611 OR56B2PQ8NGI1 322 aa12.72□□□□□ -0.37
BRAT1-201ENST00000340611 NAA60Q9H7X0 242 aa12.72□□□□□ -0.37
BRAT1-201ENST00000340611 FLNCQ14315 2725 aa12.72□□□□□ -0.37
BRAT1-201ENST00000340611 hCG_38984A0A1B0GV85 526 aa12.72□□□□□ -0.37
BRAT1-201ENST00000340611 A0A1B0GW64 132 aa12.72□□□□□ -0.37
BRAT1-201ENST00000340611 HSPB1P04792 205 aaKnown RBP12.72□□□□□ -0.37
BRAT1-201ENST00000340611 TMEM183BQ1AE95 376 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms