RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ZDHHC16Q969W1 377 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 TOLLIPQ9H0E2 274 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 NARFLQ9H6Q4 476 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 NGBQ9NPG2 151 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 LYRM2Q9NU23 88 aaPredicted RBP6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 CLN8Q9UBY8 286 aa6.1□□□□□ -1.43
SRFBP1-201ENST00000339397 A0A1B0GU03 582 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 M0R1X1 148 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 F2RL2O00254 374 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 METTL15P1P0C7V9 234 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 MUC1P15941 1255 aaPredicted RBP6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 LOXP28300 417 aaPredicted RBP6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 GPR12P47775 334 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 THNSL2Q86YJ6 484 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 MUC15Q8N387 334 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 PPP1R35Q8TAP8 253 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 SPIN2AQ99865 258 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 SPIN2BQ9BPZ2 258 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 SLC25A10Q9UBX3 287 aaPredicted RBP6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 PPIAL4EA0A075B759 164 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 TRAV3A0A0B4J244 114 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 PPIAL4DF5H284 164 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 TAAR5O14804 337 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 YPEL1O60688 119 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 MED6O75586 246 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 JTBO76095 146 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 PPIAL4FP0DN26 164 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 VAMP2P63027 116 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 PXDC1Q5TGL8 231 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 GPR157Q5UAW9 335 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 HAPLN4Q86UW8 402 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 UBAC2Q8NBM4 344 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 RNF141Q8WVD5 230 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 H1FXQ92522 213 aaKnown RBP6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 LSM10Q969L4 123 aaKnown RBP6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 YPEL2Q96QA6 119 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 OR6C3Q9NZP0 311 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 LPAR3Q9UBY5 353 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 FAM96BQ9Y3D0 163 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 PPIAL4AQ9Y536 164 aa6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 KMT2BQ9UMN6 2715 aaPredicted RBP6.09□□□□□ -1.43
SRFBP1-201ENST00000339397 ZNF462Q96JM2 2506 aa6.09□□□□□ -1.44
SRFBP1-201ENST00000339397 SAA2-SAA4A0A096LPE2 208 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 TRGV10A0A0A0MS01 117 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 DUXBA0A1W2PPF3 345 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 TNFRSF13BO14836 293 aaPredicted RBP6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 SMAD7O15105 426 aaKnown RBP6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 SYNGR2O43760 224 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 EIF3GO75821 320 aaKnown RBP eCLIP6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 P0C879 139 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 SAA2P0DJI9 122 aaPredicted RBP6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 OR2B8PP59922 312 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 RPL31P62899 125 aaKnown RBP6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 DIAPH2-AS1Q14236 149 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 FBXL19-AS1Q494R0 122 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 FAM209AQ5JX71 171 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 SPANXN5Q5MJ07 72 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 TMEM200BQ69YZ2 307 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 ATRAIDQ6UW56 229 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 LYG1Q8N1E2 194 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 BPIFCQ8NFQ6 507 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 ZNF251Q9BRH9 671 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 EGLN1Q9GZT9 426 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 GFOD1Q9NXC2 390 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 ABCA1O95477 2261 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 TRAV38-1A0A0B4J264 116 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 LRRC30A6NM36 301 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 MARCH11A6NNE9 402 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 DVL1O14640 695 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 SOD3P08294 240 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 WNT2P09544 360 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 OR9G9P0C7N8 305 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 GNLYP22749 145 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 MIDNQ504T8 468 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 NARS2Q96I59 477 aaKnown RBP6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 MED9Q9NWA0 146 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 JPT1Q9UK76 154 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 MMP24Q9Y5R2 645 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 TET2Q6N021 2002 aaPredicted RBP6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 IGHV1-69-2A0A0G2JMI3 117 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 C9JQL5 133 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 RBMXL2O75526 392 aaKnown RBP6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 GAPDHP04406 335 aaKnown RBP6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 MYOD1P15172 320 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 ATP6V0CP27449 155 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 REG1BP48304 166 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 UBE2KP61086 200 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 AVPI1Q5T686 147 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 EDARADDQ8WWZ3 215 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 MARC2Q969Z3 335 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 ARV1Q9H2C2 271 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 MS4A5Q9H3V2 200 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 RBKSQ9H477 322 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 SEBOXQ9HB31 216 aaPredicted RBP6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 PSENENQ9NZ42 101 aa6.08□□□□□ -1.44
SRFBP1-201ENST00000339397 FAM208BQ5VWN6 2430 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 B9A039 149 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 C19orf84I3L1E1 186 aa6.07□□□□□ -1.44
SRFBP1-201ENST00000339397 IGKV1-16P04430 117 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms