RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 TXN2Q99757 166 aa11.98□□□□□ -0.49
PCDH8-201ENST00000338862 SRD5A3Q9H8P0 318 aa11.98□□□□□ -0.49
PCDH8-201ENST00000338862 TCFL5Q9UL49 500 aa11.98□□□□□ -0.49
PCDH8-201ENST00000338862 M0R1X1 148 aa11.98□□□□□ -0.49
PCDH8-201ENST00000338862 KBTBD11O94819 623 aa11.98□□□□□ -0.49
PCDH8-201ENST00000338862 ERVK-16P61578 105 aa11.98□□□□□ -0.49
PCDH8-201ENST00000338862 ACOT6Q3I5F7 207 aaPredicted RBP11.98□□□□□ -0.49
PCDH8-201ENST00000338862 MRPL14Q6P1L8 145 aaKnown RBP11.98□□□□□ -0.49
PCDH8-201ENST00000338862 CARFQ8N187 725 aa11.98□□□□□ -0.49
PCDH8-201ENST00000338862 OR5A2Q8NGI9 324 aa11.98□□□□□ -0.49
PCDH8-201ENST00000338862 RIMS4Q9H426 269 aaPredicted RBP11.98□□□□□ -0.49
PCDH8-201ENST00000338862 ZNF503-AS2A6NEH8 195 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 RNF212BA8MTL3 300 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 C17orf98A8MV24 154 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 KLF7O75840 302 aaPredicted RBP11.97□□□□□ -0.49
PCDH8-201ENST00000338862 NUBP1P53384 320 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 TAS2R60P59551 318 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 CD81P60033 236 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 TNFRSF9Q07011 255 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 OR1C1Q15619 314 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 ZNF124Q15973 351 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 MIC13Q5XKP0 118 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 PRR27Q6MZM9 219 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 ATOH7Q8N100 152 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 CMTM2Q8TAZ6 248 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 ZNF391Q9UJN7 358 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 CTXND1A0A1B0GTU2 59 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 OR7C2O60412 319 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 LRRC75BQ2VPJ9 315 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 GTF3AQ92664 365 aaKnown RBP11.97□□□□□ -0.49
PCDH8-201ENST00000338862 IMMP1LQ96LU5 166 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 HSPB9Q9BQS6 159 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 TMEM147Q9BVK8 224 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 REPIN1Q9BWE0 567 aaKnown RBP11.97□□□□□ -0.49
PCDH8-201ENST00000338862 PROK2Q9HC23 129 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 DUXBA0A1W2PPF3 345 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 ODAMA1E959 279 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 M0R143 59 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 FGF5P12034 268 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 GPR12P47775 334 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 SERF2P84101 59 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 ASPHD1Q5U4P2 390 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 ABHD12Q8N2K0 398 aa11.97□□□□□ -0.49
PCDH8-201ENST00000338862 CER1O95813 267 aa11.96□□□□□ -0.49
PCDH8-201ENST00000338862 COL8A2P25067 703 aa11.96□□□□□ -0.49
PCDH8-201ENST00000338862 TFPI2P48307 235 aa11.96□□□□□ -0.49
PCDH8-201ENST00000338862 TBC1D28Q2M2D7 210 aa11.96□□□□□ -0.49
PCDH8-201ENST00000338862 MRPL54Q6P161 138 aaKnown RBP11.96□□□□□ -0.49
PCDH8-201ENST00000338862 CTDSP1Q9GZU7 261 aa11.96□□□□□ -0.49
PCDH8-201ENST00000338862 LOXL2Q9Y4K0 774 aa11.96□□□□□ -0.49
PCDH8-201ENST00000338862 PLCE1Q9P212 2302 aa11.96□□□□□ -0.49
PCDH8-201ENST00000338862 PRB4P10163 310 aaPredicted RBP11.96□□□□□ -0.49
PCDH8-201ENST00000338862 CEACAM1P13688 526 aa11.96□□□□□ -0.49
PCDH8-201ENST00000338862 IL11RAQ14626 422 aa11.96□□□□□ -0.49
PCDH8-201ENST00000338862 FXYD3Q14802 87 aa11.96□□□□□ -0.49
PCDH8-201ENST00000338862 GGNQ86UU5 652 aa11.96□□□□□ -0.49
PCDH8-201ENST00000338862 KDF1Q8NAX2 398 aaPredicted RBP11.96□□□□□ -0.49
PCDH8-201ENST00000338862 SCCPDHQ8NBX0 429 aa11.96□□□□□ -0.49
PCDH8-201ENST00000338862 MANBALQ9NQG1 85 aa11.96□□□□□ -0.49
PCDH8-201ENST00000338862 IGKV1-39P01597 117 aa11.96□□□□□ -0.5
PCDH8-201ENST00000338862 IGKV1D-39P04432 117 aa11.96□□□□□ -0.5
PCDH8-201ENST00000338862 OR5I1Q13606 314 aa11.96□□□□□ -0.5
PCDH8-201ENST00000338862 JOSD1Q15040 202 aaPredicted RBP11.96□□□□□ -0.5
PCDH8-201ENST00000338862 TMEM164Q5U3C3 297 aa11.96□□□□□ -0.5
PCDH8-201ENST00000338862 NHLRC2Q8NBF2 726 aa11.96□□□□□ -0.5
PCDH8-201ENST00000338862 PLSCR2Q9NRY7 297 aa11.96□□□□□ -0.5
PCDH8-201ENST00000338862 DECR2Q9NUI1 292 aa11.96□□□□□ -0.5
PCDH8-201ENST00000338862 NAT8BQ9UHF3 227 aa11.96□□□□□ -0.5
PCDH8-201ENST00000338862 TMEM131Q92545 1883 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 TNCP24821 2201 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 IGLV3-32A0A0A0MS00 114 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 SELLP14151 372 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 HOXA6P31267 233 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 HAPLN4Q86UW8 402 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 SAP25Q8TEE9 199 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 CT55Q8WUE5 264 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 FGF23Q9GZV9 251 aaPredicted RBP11.95□□□□□ -0.5
PCDH8-201ENST00000338862 RNF115Q9Y4L5 304 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 DSPP15924 2871 aaKnown RBP11.95□□□□□ -0.5
PCDH8-201ENST00000338862 LAMTOR5O43504 91 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 IGHV3-48P01763 117 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 CRISP2P16562 243 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 GCH1P30793 250 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 ARR3P36575 388 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 ZNF324BQ6AW86 544 aaPredicted RBP11.95□□□□□ -0.5
PCDH8-201ENST00000338862 C6orf15Q6UXA7 325 aaPredicted RBP11.95□□□□□ -0.5
PCDH8-201ENST00000338862 SLC25A40Q8TBP6 338 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 OR5P3Q8WZ94 311 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 HIPK2Q9H2X6 1198 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 A8MXE2 369 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 HAND1O96004 215 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 IGLV3-1P01715 115 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 RPL30P62888 115 aaKnown RBP11.95□□□□□ -0.5
PCDH8-201ENST00000338862 PCSK4Q6UW60 755 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 CYP2G1PQ6ZSU1 146 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 NANOS1Q8WY41 292 aaKnown RBP11.95□□□□□ -0.5
PCDH8-201ENST00000338862 TECTBQ96PL2 329 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 UHRF2Q96PU4 802 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 LRFN3Q9BTN0 628 aa11.95□□□□□ -0.5
PCDH8-201ENST00000338862 POLDIP2Q9Y2S7 368 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms