RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 PNKDQ8N490 385 aa12.02□□□□□ -0.49
CDK5RAP3-201ENST00000338399 KIR3DL3Q8N743 410 aa12.02□□□□□ -0.49
CDK5RAP3-201ENST00000338399 TCTEX1D1Q8N7M0 179 aa12.02□□□□□ -0.49
CDK5RAP3-201ENST00000338399 PPP1R1CQ8WVI7 109 aa12.02□□□□□ -0.49
CDK5RAP3-201ENST00000338399 DUXBA0A1W2PPF3 345 aa12.01□□□□□ -0.49
CDK5RAP3-201ENST00000338399 RPA2P15927 270 aa12.01□□□□□ -0.49
CDK5RAP3-201ENST00000338399 SLC25A16P16260 332 aa12.01□□□□□ -0.49
CDK5RAP3-201ENST00000338399 VDAC1P21796 283 aa12.01□□□□□ -0.49
CDK5RAP3-201ENST00000338399 DIAPH2-AS1Q14236 149 aa12.01□□□□□ -0.49
CDK5RAP3-201ENST00000338399 NDUFA5Q16718 116 aa12.01□□□□□ -0.49
CDK5RAP3-201ENST00000338399 OR13D1Q8NGV5 346 aa12.01□□□□□ -0.49
CDK5RAP3-201ENST00000338399 DDB2Q92466 427 aa12.01□□□□□ -0.49
CDK5RAP3-201ENST00000338399 HYLS1Q96M11 299 aa12.01□□□□□ -0.49
CDK5RAP3-201ENST00000338399 COMMD9Q9P000 198 aa12.01□□□□□ -0.49
CDK5RAP3-201ENST00000338399 KPTNQ9Y664 436 aa12.01□□□□□ -0.49
CDK5RAP3-201ENST00000338399 POLQO75417 2590 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 ABCA2Q9BZC7 2435 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 TRAV14DV4A0A0A6YYC5 116 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 A0A0G2JRQ6 117 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 S1PR2O95136 353 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 IGLV1-47P01700 117 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 CT45A6P0DMU7 189 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 CT45A5P0DMU8 189 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 CT45A7P0DMV0 189 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 PRTN3P24158 256 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 THBS3P49746 956 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 HLA-DRB5Q30154 266 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 C1orf122Q6ZSJ8 110 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 VMO1Q7Z5L0 202 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 FAM219AQ8IW50 185 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 LRRC75A-AS1Q8N1F1 130 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 ZNF383Q8NA42 475 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 RNASE11Q8TAA1 199 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 TNFRSF14Q92956 283 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 TMEM186Q96B77 213 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 FAM212BQ9NTI7 297 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 PRELID3BQ9Y3B1 194 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 ABCA12Q86UK0 2595 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 USF1P22415 310 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 REG1BP48304 166 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 KLRD1Q13241 179 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 IL15RAQ13261 267 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 NMSQ5H8A3 153 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 BEND2Q8NDZ0 799 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 GRPEL2Q8TAA5 225 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 CD300LFQ8TDQ1 290 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 ST6GALNAC6Q969X2 333 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 ADTRPQ96IZ2 230 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 MRPL20Q9BYC9 149 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 SIRPDQ9H106 197 aa12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 POLR3KQ9Y2Y1 108 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-201ENST00000338399 PIGBOS1A0A0B4J2F0 54 aa11.99□□□□□ -0.49
CDK5RAP3-201ENST00000338399 IGKV1-5P01602 117 aa11.99□□□□□ -0.49
CDK5RAP3-201ENST00000338399 IL3RAP26951 378 aa11.99□□□□□ -0.49
CDK5RAP3-201ENST00000338399 ZNF137PP52743 207 aa11.99□□□□□ -0.49
CDK5RAP3-201ENST00000338399 AKR1C2P52895 323 aa11.99□□□□□ -0.49
CDK5RAP3-201ENST00000338399 DVL1P1P54792 670 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-201ENST00000338399 FGL1Q08830 312 aa11.99□□□□□ -0.49
CDK5RAP3-201ENST00000338399 IZUMO4Q1ZYL8 232 aa11.99□□□□□ -0.49
CDK5RAP3-201ENST00000338399 HCP5Q6MZN7 132 aa11.99□□□□□ -0.49
CDK5RAP3-201ENST00000338399 PDZD9Q8IXQ8 264 aa11.99□□□□□ -0.49
CDK5RAP3-201ENST00000338399 GPR146Q96CH1 333 aa11.99□□□□□ -0.49
CDK5RAP3-201ENST00000338399 RBMXL1Q96E39 390 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-201ENST00000338399 PCGF1Q9BSM1 259 aa11.99□□□□□ -0.49
CDK5RAP3-201ENST00000338399 HEXA-AS1Q9H8Q6 139 aa11.99□□□□□ -0.49
CDK5RAP3-201ENST00000338399 GCN1Q92616 2671 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-201ENST00000338399 MPC2O95563 127 aa11.98□□□□□ -0.49
CDK5RAP3-201ENST00000338399 KRASP01116 189 aa11.98□□□□□ -0.49
CDK5RAP3-201ENST00000338399 EPHA1P21709 976 aa11.98□□□□□ -0.49
CDK5RAP3-201ENST00000338399 PSMB6P28072 239 aa11.98□□□□□ -0.49
CDK5RAP3-201ENST00000338399 G6PCP35575 357 aa11.98□□□□□ -0.49
CDK5RAP3-201ENST00000338399 KIR2DS2P43631 304 aa11.98□□□□□ -0.49
CDK5RAP3-201ENST00000338399 RAB32Q13637 225 aa11.98□□□□□ -0.49
CDK5RAP3-201ENST00000338399 OR4P4Q8NGL7 312 aa11.98□□□□□ -0.49
CDK5RAP3-201ENST00000338399 LSM10Q969L4 123 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-201ENST00000338399 MBD6Q96DN6 1003 aa11.98□□□□□ -0.49
CDK5RAP3-201ENST00000338399 RRNAD1Q96FB5 475 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-201ENST00000338399 FXYD6-FXYD2A0A087WZ82 144 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 BUB1B-PAK6H3BSN5 160 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 RGS13O14921 159 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 TOX4O94842 621 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 SCGB1D2O95969 90 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 HPRT1P00492 218 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 ARG1P05089 322 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 Q5PR19 223 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 THOC7Q6I9Y2 204 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 FAM71F2Q6NXP2 309 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 FOXRED2Q8IWF2 684 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 OR11H6Q8NGC7 330 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 SPIN2AQ99865 258 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 SPIN2BQ9BPZ2 258 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 UNKLQ9H9P5 680 aaKnown RBP11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 INSIG2Q9Y5U4 225 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 A0A1W2PRD5 423 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 A0A1W2PRF3 423 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 A0A1W2PRM7 423 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 RBFOX2O43251 390 aaKnown RBP eCLIP11.97□□□□□ -0.492e-11■□□□□ 9.3
CDK5RAP3-201ENST00000338399 CRYZL1O95825 349 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 MMP9P14780 707 aa11.97□□□□□ -0.49
CDK5RAP3-201ENST00000338399 HOXB4P17483 251 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms