RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 M0R1W7 72 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 S1PR2O95136 353 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 SCGB1D2O95969 90 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 PRRX1P54821 245 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 DSCR9P59020 149 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 S100A10P60903 97 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 FOXRED2Q8IWF2 684 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 ZNF596Q8TC21 504 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 RRNAD1Q96FB5 475 aaKnown RBP11.98□□□□□ -0.49
CBX3-201ENST00000337620 CLEC7AQ9BXN2 247 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 LPAR2Q9HBW0 351 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 MMP26Q9NRE1 261 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 ANKRD17O75179 2603 aaKnown RBP11.98□□□□□ -0.49
CBX3-201ENST00000337620 ABCA12Q86UK0 2595 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 KRASP01116 189 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 EPHA1P21709 976 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 REG1BP48304 166 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 THBS3P49746 956 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 IL15RAQ13261 267 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 RAB32Q13637 225 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 CLEC12BQ2HXU8 276 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 NMSQ5H8A3 153 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 THOC7Q6I9Y2 204 aaKnown RBP11.98□□□□□ -0.49
CBX3-201ENST00000337620 C11orf87Q6NUJ2 197 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 PNKDQ8N490 385 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 THAP6Q8TBB0 222 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 CD300LFQ8TDQ1 290 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 HSPB11Q9Y547 144 aa11.98□□□□□ -0.49
CBX3-201ENST00000337620 A0A0G2JRQ6 117 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 A8MXK9 166 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 FAM157AC9JC47 383 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 FOXH1O75593 365 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 IGKV1-5P01602 117 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 CT45A6P0DMU7 189 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 CT45A5P0DMU8 189 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 CT45A7P0DMV0 189 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 G6PCP35575 357 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 IZUMO4Q1ZYL8 232 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 ZNF833PQ6ZTB9 187 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 ZNF383Q8NA42 475 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 OR13D1Q8NGV5 346 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 GPR146Q96CH1 333 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 ADTRPQ96IZ2 230 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 SPIN2AQ99865 258 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 SPIN2BQ9BPZ2 258 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 PLSCR3Q9NRY6 295 aa11.97□□□□□ -0.49
CBX3-201ENST00000337620 FAM212BQ9NTI7 297 aaPredicted RBP11.97□□□□□ -0.49
CBX3-201ENST00000337620 IGHV2-70DA0A0C4DH43 119 aa11.96□□□□□ -0.49
CBX3-201ENST00000337620 ARPC5O15511 151 aa11.96□□□□□ -0.49
CBX3-201ENST00000337620 PAX2Q02962 417 aa11.96□□□□□ -0.49
CBX3-201ENST00000337620 DIAPH2-AS1Q14236 149 aa11.96□□□□□ -0.49
CBX3-201ENST00000337620 LAMTOR1Q6IAA8 161 aa11.96□□□□□ -0.49
CBX3-201ENST00000337620 ZNF546Q86UE3 836 aa11.96□□□□□ -0.49
CBX3-201ENST00000337620 C9orf62Q8N4C0 152 aa11.96□□□□□ -0.49
CBX3-201ENST00000337620 DDB2Q92466 427 aa11.96□□□□□ -0.49
CBX3-201ENST00000337620 TNFRSF14Q92956 283 aa11.96□□□□□ -0.49
CBX3-201ENST00000337620 LSM10Q969L4 123 aaKnown RBP11.96□□□□□ -0.49
CBX3-201ENST00000337620 TMEM186Q96B77 213 aa11.96□□□□□ -0.49
CBX3-201ENST00000337620 MBD2Q9UBB5 411 aa11.96□□□□□ -0.49
CBX3-201ENST00000337620 PRTN3P24158 256 aa11.96□□□□□ -0.5
CBX3-201ENST00000337620 IL3RAP26951 378 aa11.96□□□□□ -0.5
CBX3-201ENST00000337620 KIR2DS2P43631 304 aa11.96□□□□□ -0.5
CBX3-201ENST00000337620 HLA-DRB5Q30154 266 aa11.96□□□□□ -0.5
CBX3-201ENST00000337620 MRPL20Q9BYC9 149 aaKnown RBP11.96□□□□□ -0.5
CBX3-201ENST00000337620 LSM5Q9Y4Y9 91 aaKnown RBP11.96□□□□□ -0.5
CBX3-201ENST00000337620 APCP25054 2843 aa11.96□□□□□ -0.5
CBX3-201ENST00000337620 H0YIZ8 118 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 ATG12O94817 140 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 HPRT1P00492 218 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 IGLV1-47P01700 117 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 MBPP02686 304 aaPredicted RBP11.95□□□□□ -0.5
CBX3-201ENST00000337620 SLC25A4P12235 298 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 DEFB113Q30KQ7 82 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 LGALSLQ3ZCW2 172 aaPredicted RBP11.95□□□□□ -0.5
CBX3-201ENST00000337620 C1orf122Q6ZSJ8 110 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 VMO1Q7Z5L0 202 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 PDZD9Q8IXQ8 264 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 KIR3DL3Q8N743 410 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 RBMXL1Q96E39 390 aaKnown RBP11.95□□□□□ -0.5
CBX3-201ENST00000337620 PCGF1Q9BSM1 259 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 RNF126Q9BV68 326 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 BEX4Q9NWD9 120 aaPredicted RBP11.95□□□□□ -0.5
CBX3-201ENST00000337620 KPTNQ9Y664 436 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 HMSDA8MTL9 139 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 NXPH3O95157 252 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 KLRD1Q13241 179 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 Q6ZRM9 215 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 TGIF2LXQ8IUE1 241 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 BEND2Q8NDZ0 799 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 OR4D5Q8NGN0 318 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 OR4S2Q8NH73 311 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 OR1S1Q8NH92 325 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 ST6GALNAC6Q969X2 333 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 HEXA-AS1Q9H8Q6 139 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 PLEKHA2Q9HB19 425 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 OR5AC2Q9NZP5 309 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 CACNG5Q9UF02 275 aa11.95□□□□□ -0.5
CBX3-201ENST00000337620 A0A1B0GU03 582 aa11.94□□□□□ -0.5
CBX3-201ENST00000337620 BUB1B-PAK6H3BSN5 160 aa11.94□□□□□ -0.5
CBX3-201ENST00000337620 RBFOX2O43251 390 aaKnown RBP eCLIP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms