RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 IGKV3-7A0A075B6H7 116 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 TRGC1P0CF51 173 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 GFRA1P56159 465 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 SCN7AQ01118 1682 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 IGHV3OR15-7A0A075B7D8 119 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 ZNF324BQ6AW86 544 aaPredicted RBP11.3□□□□□ -0.6
HLCS-201ENST00000336648 RAX2Q96IS3 184 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 ZNF385AQ96PM9 386 aaKnown RBP11.3□□□□□ -0.6
HLCS-201ENST00000336648 CCL21O00585 134 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 SOSTQ9BQB4 213 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 IDI2-AS1Q9NZ38 188 aa11.3□□□□□ -0.6
HLCS-201ENST00000336648 NDUFB4O95168 129 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 RPS11P62280 158 aaKnown RBP eCLIP11.29□□□□□ -0.6
HLCS-201ENST00000336648 FAM106AQ4KMX7 169 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 SLC25A47Q6Q0C1 308 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 PGLYRP4Q96LB8 373 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 JPT1Q9UK76 154 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 SPCS1Q9Y6A9 102 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 A0A0J9YW62 118 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 LIMS1P48059 325 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 PRSS12P56730 875 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 HSPE1P61604 102 aaKnown RBP11.29□□□□□ -0.6
HLCS-201ENST00000336648 CD300CQ08708 224 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 RIPPLY2Q5TAB7 128 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 TTC9CQ8N5M4 171 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 OR4D5Q8NGN0 318 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 OPN3Q9H1Y3 402 aaPredicted RBP11.29□□□□□ -0.6
HLCS-201ENST00000336648 METTL1Q9UBP6 276 aaKnown RBP11.29□□□□□ -0.6
HLCS-201ENST00000336648 TYMSP04818 313 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 C8orf88P0DMB2 117 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 PRR7Q8TB68 274 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 WNT2BQ93097 391 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 TNFRSF19Q9NS68 423 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 KCNE5Q9UJ90 142 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 TRAV39A0A0B4J263 110 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 HRKO00198 91 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 NANOS3P60323 173 aaKnown RBP11.29□□□□□ -0.6
HLCS-201ENST00000336648 PCSK4Q6UW60 755 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 GGACTQ9BVM4 153 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 RBKSQ9H477 322 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 LPAR2Q9HBW0 351 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 EVPLQ92817 2033 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 OR11H12B2RN74 326 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 OR2H2O95918 312 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 VSIG10L2P0DP72 767 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 OR11H1Q8NG94 326 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 OR11H2Q8NH07 326 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 SPSB4Q96A44 273 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 ZNF501Q96CX3 271 aaPredicted RBP11.29□□□□□ -0.6
HLCS-201ENST00000336648 FOXC2Q99958 501 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 PRSS27Q9BQR3 290 aa11.29□□□□□ -0.6
HLCS-201ENST00000336648 AKAP11Q9UKA4 1901 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 TSPAN2O60636 221 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 UPK3AO75631 287 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 SRIP30626 198 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 TCF23Q7RTU1 214 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 DNAJC4Q9NNZ3 241 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 NPIPB9F8W1W9 429 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 NPIPB7O75200 414 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 CA7P43166 264 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 CKS1BP61024 79 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 AQP3Q92482 292 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 TMEM101Q96IK0 257 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 RCC1P18754 421 aaPredicted RBP11.28□□□□□ -0.6
HLCS-201ENST00000336648 UCP3P55916 312 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.28□□□□□ -0.6
HLCS-201ENST00000336648 DNM1P46Q6ZS02 220 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 SMOC1Q9H4F8 434 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 DOCK2Q92608 1830 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 TNRC6CQ9HCJ0 1690 aaKnown RBP11.28□□□□□ -0.6
HLCS-201ENST00000336648 TRAV8-2A0A0B4J237 113 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 FAM216AQ8WUB2 273 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 SSBP4Q9BWG4 385 aaPredicted RBP11.28□□□□□ -0.6
HLCS-201ENST00000336648 USP54Q70EL1 1684 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 PGPA6NDG6 321 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 NMBP08949 121 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 OR8G5Q8NG78 346 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 KCNK17Q96T54 332 aa11.28□□□□□ -0.6
HLCS-201ENST00000336648 MYO5AQ9Y4I1 1855 aaKnown RBP11.27□□□□□ -0.6
HLCS-201ENST00000336648 TRBV5-7A0A0A0MS05 114 aa11.27□□□□□ -0.6
HLCS-201ENST00000336648 PGLYRP1O75594 196 aaPredicted RBP11.27□□□□□ -0.6
HLCS-201ENST00000336648 WISP3O95389 354 aaPredicted RBP11.27□□□□□ -0.6
HLCS-201ENST00000336648 GHRHP01286 108 aa11.27□□□□□ -0.6
HLCS-201ENST00000336648 HLA-DQB1P01920 261 aa11.27□□□□□ -0.6
HLCS-201ENST00000336648 CXCL2P19875 107 aa11.27□□□□□ -0.6
HLCS-201ENST00000336648 ANOS1P23352 680 aa11.27□□□□□ -0.6
HLCS-201ENST00000336648 OR52M1Q8NGK5 317 aa11.27□□□□□ -0.6
HLCS-201ENST00000336648 ADAMTSL3P82987 1691 aa11.27□□□□□ -0.6
HLCS-201ENST00000336648 A0A1W2PQM1 296 aa11.27□□□□□ -0.61
HLCS-201ENST00000336648 ERGP11308 486 aa11.27□□□□□ -0.61
HLCS-201ENST00000336648 PEBP1P30086 187 aaKnown RBP11.27□□□□□ -0.61
HLCS-201ENST00000336648 TMEM186Q96B77 213 aa11.27□□□□□ -0.61
HLCS-201ENST00000336648 SMIM8Q96KF7 97 aa11.27□□□□□ -0.61
HLCS-201ENST00000336648 CCL13Q99616 98 aa11.27□□□□□ -0.61
HLCS-201ENST00000336648 IL36RNQ9UBH0 155 aa11.27□□□□□ -0.61
HLCS-201ENST00000336648 PUSL1Q8N0Z8 303 aaKnown RBP11.27□□□□□ -0.61
HLCS-201ENST00000336648 AICDAQ9GZX7 198 aa11.27□□□□□ -0.61
HLCS-201ENST00000336648 KLHDC2Q9Y2U9 406 aa11.27□□□□□ -0.61
HLCS-201ENST00000336648 PHLDA3Q9Y5J5 127 aa11.27□□□□□ -0.61
HLCS-201ENST00000336648 IGHV1-45A0A0A0MS14 117 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms