RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 CST9LP1Q5W188 147 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 Q6ZS49 121 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 SMIM15Q7Z3B0 74 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 WDR31Q8NA23 367 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 OR1L1Q8NH94 360 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 TMUB1Q9BVT8 246 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 ELOVL1Q9BW60 279 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 BIN3Q9NQY0 253 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 TRBV6-6A0A0A6YYG2 114 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 J3KRW8 73 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 SCTP09683 121 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 SRP14P37108 136 aaKnown RBP5.81□□□□□ -1.48
SF3B1-201ENST00000335508 WDR82Q6UXN9 313 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 HEPN1Q6WQI6 88 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 NUP37Q8NFH4 326 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 OR2T6Q8NHC8 308 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 CXorf58Q96LI9 332 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 GINS3Q9BRX5 216 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 NARFLQ9H6Q4 476 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 IFT22Q9H7X7 185 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 CEACAM18A8MTB9 384 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 OR7C2O60412 319 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 GATA4P43694 442 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 PJVKQ0ZLH3 352 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 C15orf54Q8N8G6 183 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 HDHD3Q9BSH5 251 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-201ENST00000335508 COA4Q9NYJ1 87 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 FAM215AQ9Y5M1 114 aa5.81□□□□□ -1.48
SF3B1-201ENST00000335508 IGLV3-9A0A075B6K5 115 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 DPRXA6NFQ7 191 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 S100A8P05109 93 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 FAM106CPP0CH98 169 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 EXOSC2Q13868 293 aaKnown RBP5.8□□□□□ -1.48
SF3B1-201ENST00000335508 PLAC9Q5JTB6 97 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 ZNF600Q6ZNG1 722 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 USP24Q9UPU5 2620 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 YPEL1O60688 119 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 MBPP02686 304 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-201ENST00000335508 IL34Q6ZMJ4 242 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 LYZL2Q7Z4W2 148 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 COMMD7Q86VX2 200 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 FGFRL1Q8N441 504 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 YPEL2Q96QA6 119 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 RASL11BQ9BPW5 248 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 PNRC2Q9NPJ4 139 aaKnown RBP5.8□□□□□ -1.48
SF3B1-201ENST00000335508 MARCH11A6NNE9 402 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 CHST1O43916 411 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 PTBP3O95758 552 aaKnown RBP5.8□□□□□ -1.48
SF3B1-201ENST00000335508 IAPPP10997 89 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 S100A2P29034 98 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 BTNL8Q6UX41 500 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 RTN4RL2Q86UN3 420 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 ZNRF1Q8ND25 227 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 TICRRQ7Z2Z1 1910 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 LOC105371242A0A075B767 164 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 A0A0U1RQK1 487 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 ZNF320A2RRD8 509 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 RGS13O14921 159 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 TNFSF13O75888 250 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 CRYBA1P05813 215 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 OR13C7P0DN81 318 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 ZNF14P17017 642 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-201ENST00000335508 ASPHD2Q6ICH7 369 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 DHRS11Q6UWP2 260 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 ZNF788Q6ZQV5 615 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 SELENOHQ8IZQ5 122 aaKnown RBP5.8□□□□□ -1.48
SF3B1-201ENST00000335508 SSX4O60224 188 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 ZNF205O95201 554 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 RAB9AP51151 201 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 ARF6P62330 175 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 TMEM255AQ5JRV8 349 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 LCN15Q6UWW0 184 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 PQLC2Q6ZP29 291 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 PAQR4Q8N4S7 273 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-201ENST00000335508 FAM216BQ8N7L0 139 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 NDFIP1Q9BT67 221 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 NPVFQ9HCQ7 196 aa5.8□□□□□ -1.48
SF3B1-201ENST00000335508 NCBP2LA6PVI3 153 aaKnown RBP5.79□□□□□ -1.48
SF3B1-201ENST00000335508 C1orf196B1AJZ1 125 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 METTL15P1P0C7V9 234 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 SLC25A6P12236 298 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 UQCC3Q6UW78 93 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 ABHD12Q8N2K0 398 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 DRAM1Q8N682 238 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 OR1L4Q8NGR5 311 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 PCGF1Q9BSM1 259 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 CHODLQ9H9P2 273 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 A0A1B0GV50 99 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 FAM24AA6NFZ4 105 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 GNG7O60262 68 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 UBE2G1P62253 170 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 HLA-DRB5Q30154 266 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 FBXL19-AS1Q494R0 122 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 LRTM2Q8N967 370 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 RCL1Q9Y2P8 373 aaKnown RBP5.79□□□□□ -1.48
SF3B1-201ENST00000335508 ITGB1BP1O14713 200 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 IGLV1-44P01699 117 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 CXCL3P19876 107 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 WNT5AP41221 380 aa5.79□□□□□ -1.48
SF3B1-201ENST00000335508 TOR2AQ5JU69 321 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms