RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CCL8P80075 99 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 BSPH1Q075Z2 132 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 HABP2Q14520 560 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-201ENST00000334136 SNAI3Q3KNW1 292 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 DPPA3Q6W0C5 159 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 MRPL30Q8TCC3 161 aaKnown RBP10.04□□□□□ -0.8
HDAC6-201ENST00000334136 LRRC29Q8WV35 223 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 GALMQ96C23 342 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 NEIL1Q96FI4 390 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-201ENST00000334136 Q9N2K0 584 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 DMRT1Q9Y5R6 373 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 PCNX3Q9H6A9 2034 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 TRDCB7Z8K6 153 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 KLF14Q8TD94 323 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-201ENST00000334136 FAM215AQ9Y5M1 114 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 FREM1Q5H8C1 2179 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 IGHV3-43A0A0B4J1X8 118 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 IGHV3-43DP0DP04 118 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 AMTP48728 403 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 HNRNPA3P51991 378 aaKnown RBP10.04□□□□□ -0.8
HDAC6-201ENST00000334136 CIB3Q96Q77 187 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-201ENST00000334136 ELOVL1Q9BW60 279 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 TREM2Q9NZC2 230 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 ZNF292O60281 2723 aa10.04□□□□□ -0.8
HDAC6-201ENST00000334136 DUXBA0A1W2PPF3 345 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 C20orf202A1L168 122 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 CRYM-AS1A6NIL9 109 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 CELA3BP08861 270 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 CDC34P49427 236 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-201ENST00000334136 TCL1AP56279 114 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 PLGLAQ15195 96 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 ZNF474Q6S9Z5 364 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-201ENST00000334136 Q8IYB0 196 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 OR5B3Q8NH48 314 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 RAB1CQ92928 201 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 TMEM204Q9BSN7 226 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 MYOZ1Q9NP98 299 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-201ENST00000334136 ARL2-SNX15V9GYD0 113 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-201ENST00000334136 B4DEV8 164 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 C11orf94C9JXX5 98 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 CDIPTO14735 213 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 SYNGR3O43761 229 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 BCL2P10415 239 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 PSG2P11465 335 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 CEACAM8P31997 349 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-201ENST00000334136 MDH2P40926 338 aaKnown RBP10.03□□□□□ -0.8
HDAC6-201ENST00000334136 FAM3BP58499 235 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-201ENST00000334136 MOGAT3Q86VF5 341 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 Q8NA96 180 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 OR5A2Q8NGI9 324 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 ZNF488Q96MN9 340 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 PCGF1Q9BSM1 259 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 PTPN13Q12923 2485 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 MED13LQ71F56 2210 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 EML6Q6ZMW3 1958 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 ZNF735P0CB33 412 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 OR5I1Q13606 314 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 ACSM6Q6P461 480 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 CMTM2Q8TAZ6 248 aa10.03□□□□□ -0.8
HDAC6-201ENST00000334136 IGHV2OR16-5A0A0B4J2B6 119 aa10.02□□□□□ -0.8
HDAC6-201ENST00000334136 C3orf80F5H4A9 247 aa10.02□□□□□ -0.8
HDAC6-201ENST00000334136 SCTP09683 121 aa10.02□□□□□ -0.8
HDAC6-201ENST00000334136 CRISP2P16562 243 aa10.02□□□□□ -0.8
HDAC6-201ENST00000334136 BCL3P20749 454 aa10.02□□□□□ -0.8
HDAC6-201ENST00000334136 C16orf82Q7Z2V1 217 aa10.02□□□□□ -0.8
HDAC6-201ENST00000334136 MUC15Q8N387 334 aa10.02□□□□□ -0.8
HDAC6-201ENST00000334136 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.02□□□□□ -0.8
HDAC6-201ENST00000334136 E9PQ18 207 aa10.02□□□□□ -0.81
HDAC6-201ENST00000334136 FGFBP3Q8TAT2 258 aa10.02□□□□□ -0.81
HDAC6-201ENST00000334136 SMIM8Q96KF7 97 aa10.02□□□□□ -0.81
HDAC6-201ENST00000334136 OR2D2Q9H210 308 aa10.02□□□□□ -0.81
HDAC6-201ENST00000334136 KCNIP2Q9NS61 270 aa10.02□□□□□ -0.81
HDAC6-201ENST00000334136 J3QW42 95 aa10.02□□□□□ -0.81
HDAC6-201ENST00000334136 BTNL3Q6UXE8 466 aa10.02□□□□□ -0.81
HDAC6-201ENST00000334136 VN1R17PQ8TDU5 208 aa10.02□□□□□ -0.81
HDAC6-201ENST00000334136 TBX15Q96SF7 602 aa10.02□□□□□ -0.81
HDAC6-201ENST00000334136 RTBDNQ9BSG5 229 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-201ENST00000334136 PKD1L2Q7Z442 2459 aa10.02□□□□□ -0.81
HDAC6-201ENST00000334136 ENSAO43768 121 aaKnown RBP10.01□□□□□ -0.81
HDAC6-201ENST00000334136 OR10J4P0C629 311 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 HLA-GP17693 338 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 OR3A1P47881 315 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 ETFRF1Q6IPR1 90 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 MYO18BQ8IUG5 2567 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 J3QKU1 62 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 FCGR3BO75015 233 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 OR5G3P0C626 314 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 APOBEC3AP31941 199 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-201ENST00000334136 FHL1Q13642 323 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 TMEM183BQ1AE95 376 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 POM121L2Q96KW2 1035 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 PLSCR2Q9NRY7 297 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 PSG11Q9UQ72 335 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 UQCRFS1P47985 274 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 OR8G5Q8NG78 346 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 ABHD14AQ9BUJ0 271 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 CBLN4Q9NTU7 201 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 PLCE1Q9P212 2302 aa10.01□□□□□ -0.81
HDAC6-201ENST00000334136 M0R1X1 148 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms