RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 SLC35D1Q9NTN3 355 aa17.43■□□□□ 0.38
CMTM4-201ENST00000330687 RPH3ALQ9UNE2 315 aa17.43■□□□□ 0.38
CMTM4-201ENST00000330687 A0A096LPE4 126 aa17.43■□□□□ 0.38
CMTM4-201ENST00000330687 A0A1W2PPZ6 126 aa17.43■□□□□ 0.38
CMTM4-201ENST00000330687 ODAMA1E959 279 aa17.43■□□□□ 0.38
CMTM4-201ENST00000330687 SRIP30626 198 aa17.43■□□□□ 0.38
CMTM4-201ENST00000330687 FGFBP3Q8TAT2 258 aa17.43■□□□□ 0.38
CMTM4-201ENST00000330687 NABP1Q96AH0 204 aa17.43■□□□□ 0.38
CMTM4-201ENST00000330687 FSCN3Q9NQT6 498 aa17.43■□□□□ 0.38
CMTM4-201ENST00000330687 SLC45A2Q9UMX9 530 aa17.43■□□□□ 0.38
CMTM4-201ENST00000330687 COX11Q9Y6N1 276 aa17.43■□□□□ 0.38
CMTM4-201ENST00000330687 ZNF318Q5VUA4 2279 aa17.43■□□□□ 0.38
CMTM4-201ENST00000330687 GCM1Q9NP62 436 aa17.43■□□□□ 0.38
CMTM4-201ENST00000330687 TRAPPC2LQ9UL33 140 aa17.43■□□□□ 0.38
CMTM4-201ENST00000330687 ZNF441Q8N8Z8 693 aa17.42■□□□□ 0.38
CMTM4-201ENST00000330687 IGLV3-1P01715 115 aa17.42■□□□□ 0.38
CMTM4-201ENST00000330687 GPX1P07203 203 aa17.42■□□□□ 0.38
CMTM4-201ENST00000330687 C3orf79P0CE67 100 aa17.42■□□□□ 0.38
CMTM4-201ENST00000330687 PSG1P11464 419 aa17.42■□□□□ 0.38
CMTM4-201ENST00000330687 OR4A47Q6IF82 309 aa17.42■□□□□ 0.38
CMTM4-201ENST00000330687 TCTEX1D1Q8N7M0 179 aa17.42■□□□□ 0.38
CMTM4-201ENST00000330687 ZNF439Q8NDP4 499 aa17.42■□□□□ 0.38
CMTM4-201ENST00000330687 ORAOV1Q8WV07 137 aa17.42■□□□□ 0.38
CMTM4-201ENST00000330687 SSMEM1Q8WWF3 244 aa17.42■□□□□ 0.38
CMTM4-201ENST00000330687 NPCDR1Q9BY65 106 aa17.42■□□□□ 0.38
CMTM4-201ENST00000330687 DEFB126Q9BYW3 111 aa17.42■□□□□ 0.38
CMTM4-201ENST00000330687 IGHV4-34P06331 123 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 GABRG2P18507 467 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 TMEM147Q9BVK8 224 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 QTRT1Q9BXR0 403 aaKnown RBP17.41■□□□□ 0.38
CMTM4-201ENST00000330687 CLCF1Q9UBD9 225 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 AHCTF1Q8WYP5 2266 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 THADAQ6YHU6 1953 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 A0A1B0GX78 115 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 ARL14EPLP0DKL9 152 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 GLB1P16278 677 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 COMPP49747 757 aaPredicted RBP17.41■□□□□ 0.38
CMTM4-201ENST00000330687 GFRA1P56159 465 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 FAM53AQ6NSI3 398 aaPredicted RBP17.41■□□□□ 0.38
CMTM4-201ENST00000330687 FAM234AQ9H0X4 552 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 WASHC3Q9Y3C0 194 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 TSPOP30536 169 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 LINC00205P59089 165 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 TMEM144Q7Z5S9 345 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 KLHDC1Q8N7A1 406 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 TSTD1Q8NFU3 115 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 COL6A3P12111 3177 aa17.41■□□□□ 0.38
CMTM4-201ENST00000330687 RAMP3O60896 148 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 CA6P23280 308 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 TNFRSF4P43489 277 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 PDLIM3Q53GG5 364 aaPredicted RBP17.4■□□□□ 0.38
CMTM4-201ENST00000330687 KIAA0895LQ68EN5 471 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 CENPVQ7Z7K6 275 aaPredicted RBP17.4■□□□□ 0.38
CMTM4-201ENST00000330687 HIPK2Q9H2X6 1198 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 CRIM1Q9NZV1 1036 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 A8MXE2 369 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 CTSSP25774 331 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 FASLGP48023 281 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 RPL19P84098 196 aaKnown RBP17.4■□□□□ 0.38
CMTM4-201ENST00000330687 CEACAM16Q2WEN9 425 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 SLC23A3Q6PIS1 610 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 KIAA1549Q9HCM3 1950 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 RAB29O14966 203 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 TNFSF4P23510 183 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 KCNMB1Q16558 191 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 STUMQ69YW2 141 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 DOLPP1Q86YN1 238 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 MMD2Q8IY49 270 aa17.4■□□□□ 0.38
CMTM4-201ENST00000330687 C19orf25Q9UFG5 118 aaPredicted RBP17.4■□□□□ 0.38
CMTM4-201ENST00000330687 FREM1Q5H8C1 2179 aa17.39■□□□□ 0.38
CMTM4-201ENST00000330687 TIMP3P35625 211 aa17.39■□□□□ 0.37
CMTM4-201ENST00000330687 FOXL1Q12952 345 aa17.39■□□□□ 0.37
CMTM4-201ENST00000330687 LTC4SQ16873 150 aa17.39■□□□□ 0.37
CMTM4-201ENST00000330687 MTCH1Q9NZJ7 389 aa17.39■□□□□ 0.37
CMTM4-201ENST00000330687 CLDN14O95500 239 aa17.39■□□□□ 0.37
CMTM4-201ENST00000330687 PRDX4Q13162 271 aa17.39■□□□□ 0.37
CMTM4-201ENST00000330687 BADQ92934 168 aa17.39■□□□□ 0.37
CMTM4-201ENST00000330687 ACTL6BO94805 426 aa17.38■□□□□ 0.37
CMTM4-201ENST00000330687 CELA2AP08217 269 aa17.38■□□□□ 0.37
CMTM4-201ENST00000330687 SUMO3P55854 103 aaPredicted RBP17.38■□□□□ 0.37
CMTM4-201ENST00000330687 C10orf35Q96D05 121 aa17.38■□□□□ 0.37
CMTM4-201ENST00000330687 ARL2-SNX15V9GYD0 113 aa17.38■□□□□ 0.37
CMTM4-201ENST00000330687 PDE6DO43924 150 aa17.38■□□□□ 0.37
CMTM4-201ENST00000330687 RPL31P62899 125 aaKnown RBP17.38■□□□□ 0.37
CMTM4-201ENST00000330687 MRPL21Q7Z2W9 205 aaKnown RBP17.38■□□□□ 0.37
CMTM4-201ENST00000330687 OR5A2Q8NGI9 324 aa17.38■□□□□ 0.37
CMTM4-201ENST00000330687 BCL2L2Q92843 193 aaPredicted RBP17.38■□□□□ 0.37
CMTM4-201ENST00000330687 FAM122AQ96E09 287 aa17.38■□□□□ 0.37
CMTM4-201ENST00000330687 CTXN2P0C2S0 81 aa17.37■□□□□ 0.37
CMTM4-201ENST00000330687 HIST3H3Q16695 136 aa17.37■□□□□ 0.37
CMTM4-201ENST00000330687 PCSK4Q6UW60 755 aa17.37■□□□□ 0.37
CMTM4-201ENST00000330687 VASH2Q86V25 355 aa17.37■□□□□ 0.37
CMTM4-201ENST00000330687 HS3ST3A1Q9Y663 406 aa17.37■□□□□ 0.37
CMTM4-201ENST00000330687 MUC22E2RYF6 1773 aaPredicted RBP17.37■□□□□ 0.37
CMTM4-201ENST00000330687 LINC01565O15544 149 aa17.37■□□□□ 0.37
CMTM4-201ENST00000330687 MLNRO43193 412 aa17.37■□□□□ 0.37
CMTM4-201ENST00000330687 HSBP1O75506 76 aa17.37■□□□□ 0.37
CMTM4-201ENST00000330687 CD99P14209 185 aa17.37■□□□□ 0.37
CMTM4-201ENST00000330687 RHBDD2Q6NTF9 364 aa17.37■□□□□ 0.37
CMTM4-201ENST00000330687 RNASE7Q9H1E1 156 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms