RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 IL15RAQ13261 267 aa13.45□□□□□ -0.26
PDLIM1-201ENST00000329399 GGNBP1Q5YKI7 109 aa13.45□□□□□ -0.26
PDLIM1-201ENST00000329399 TP53RKQ96S44 253 aa13.45□□□□□ -0.26
PDLIM1-201ENST00000329399 IDI2-AS1Q9NZ38 188 aa13.45□□□□□ -0.26
PDLIM1-201ENST00000329399 INSIG2Q9Y5U4 225 aa13.45□□□□□ -0.26
PDLIM1-201ENST00000329399 KIAA2026Q5HYC2 2103 aa13.45□□□□□ -0.26
PDLIM1-201ENST00000329399 CCSO14618 274 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 OR2F2O95006 317 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 MPC2O95563 127 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 LYL1P12980 280 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 SRP14P37108 136 aaKnown RBP13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 GNB2P62879 340 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 OR2F1Q13607 317 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 ZNF345Q14585 488 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 C17orf58Q2M2W7 97 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 IAH1Q2TAA2 248 aaPredicted RBP13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 LAMTOR1Q6IAA8 161 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 C5orf24Q7Z6I8 188 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 ZNF546Q86UE3 836 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 DRAM1Q8N682 238 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 C8orf31Q8N9H6 132 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 OR8B3Q8NGG8 313 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 SEC22AQ96IW7 307 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 OR8B2Q96RD0 313 aa13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 PAIP2BQ9ULR5 123 aaKnown RBP13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 SOX21Q9Y651 276 aaPredicted RBP13.44□□□□□ -0.26
PDLIM1-201ENST00000329399 PPIAL4CA0A0B4J2A2 164 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 L7N2F9 121 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 ADAP1O75689 374 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 IGLV2-14P01704 120 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 HNF1AP20823 631 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 PPP1CCP36873 323 aaKnown RBP13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 NUP62P37198 522 aaPredicted RBP13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 PAX8Q06710 450 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 SMCO1Q147U7 214 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 SP6Q3SY56 376 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 KLF17Q5JT82 389 aaPredicted RBP13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 TMEM268Q5VZI3 342 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 HEPN1Q6WQI6 88 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 SELENOHQ8IZQ5 122 aaKnown RBP13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 GRPEL2Q8TAA5 225 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 RFESDQ8TAC1 157 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 LSM10Q969L4 123 aaKnown RBP13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 WDR89Q96FK6 387 aaPredicted RBP13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 ZNF714Q96N38 554 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 AGMATQ9BSE5 352 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 OR2D2Q9H210 308 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 DSCAML1Q8TD84 2053 aa13.43□□□□□ -0.26
PDLIM1-201ENST00000329399 FXYD6-FXYD2A0A087WZ82 144 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 DVL1O14640 695 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 FSHBP01225 129 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 RBP4P02753 201 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 KIR2DS2P43631 304 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 LGALSLQ3ZCW2 172 aaPredicted RBP13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 Q5BKY6 102 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 PRSS54Q6PEW0 395 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 ACOT7LQ6ZUV0 252 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 FAM219AQ8IW50 185 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 INO80EQ8NBZ0 244 aaPredicted RBP13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 ADTRPQ96IZ2 230 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 OR10C1Q96KK4 312 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 RPUSD1Q9UJJ7 312 aaKnown RBP13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 TRAV14DV4A0A0A6YYC5 116 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 IGHV2-70DA0A0C4DH43 119 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 S100A11P31949 105 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 GPR12P47775 334 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 ARHGDIBP52566 201 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 EIF4EBP1Q13541 118 aaPredicted RBP13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 THOC7Q6I9Y2 204 aaKnown RBP13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 ZNF767PQ75MW2 155 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 LYZL2Q7Z4W2 148 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 C22orf15Q8WYQ4 148 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 DCTN5Q9BTE1 182 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 MFFQ9GZY8 342 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 CACFD1Q9UGQ2 172 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 TNFSF18Q9UNG2 199 aa13.42□□□□□ -0.26
PDLIM1-201ENST00000329399 TENM1Q9UKZ4 2725 aa13.41□□□□□ -0.26
PDLIM1-201ENST00000329399 A0A1B0GU03 582 aa13.41□□□□□ -0.26
PDLIM1-201ENST00000329399 J3QLI3 93 aa13.41□□□□□ -0.26
PDLIM1-201ENST00000329399 RAB29O14966 203 aa13.41□□□□□ -0.26
PDLIM1-201ENST00000329399 RBFOX2O43251 390 aaKnown RBP eCLIP13.41□□□□□ -0.26
PDLIM1-201ENST00000329399 GNMTQ14749 295 aa13.41□□□□□ -0.26
PDLIM1-201ENST00000329399 SLC35G3Q8N808 338 aa13.41□□□□□ -0.26
PDLIM1-201ENST00000329399 C8orf46Q8TAG6 207 aa13.41□□□□□ -0.26
PDLIM1-201ENST00000329399 ABHD14AQ9BUJ0 271 aa13.41□□□□□ -0.26
PDLIM1-201ENST00000329399 PSG11Q9UQ72 335 aa13.41□□□□□ -0.26
PDLIM1-201ENST00000329399 AUP1Q9Y679 476 aa13.41□□□□□ -0.26
PDLIM1-201ENST00000329399 IGHV3OR16-10A0A075B7F0 116 aa13.4□□□□□ -0.26
PDLIM1-201ENST00000329399 hCG_1809904A0A1W2PP81 198 aa13.4□□□□□ -0.26
PDLIM1-201ENST00000329399 A0A1W2PPE2 198 aa13.4□□□□□ -0.26
PDLIM1-201ENST00000329399 A0A1W2PR64 198 aa13.4□□□□□ -0.26
PDLIM1-201ENST00000329399 A0A1W2PRV1 198 aa13.4□□□□□ -0.26
PDLIM1-201ENST00000329399 MMP9P14780 707 aa13.4□□□□□ -0.26
PDLIM1-201ENST00000329399 GATA3P23771 443 aa13.4□□□□□ -0.26
PDLIM1-201ENST00000329399 TAGLNQ01995 201 aaKnown RBP13.4□□□□□ -0.26
PDLIM1-201ENST00000329399 TMEM200BQ69YZ2 307 aa13.4□□□□□ -0.26
PDLIM1-201ENST00000329399 TCF23Q7RTU1 214 aa13.4□□□□□ -0.26
PDLIM1-201ENST00000329399 BCL6BQ8N143 479 aaPredicted RBP13.4□□□□□ -0.26
PDLIM1-201ENST00000329399 UBALD1Q8TB05 177 aa13.4□□□□□ -0.26
PDLIM1-201ENST00000329399 SDHAF2Q9NX18 166 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms