RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 TIMP3P35625 211 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 MEF2CQ06413 473 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-201ENST00000328923 DMRTC1Q5HYR2 192 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 TMEM92Q6UXU6 159 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 OR51T1Q8NGJ9 327 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 PIEZO1Q92508 2521 aa10.07□□□□□ -0.8
SHMT2-201ENST00000328923 CACNA1IQ9P0X4 2223 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 GAGE12HA6NDE8 117 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 SNURFLB1AK76 121 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 H0Y8X5 98 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 UTS2O95399 124 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 HNRNPA2B1P22626 353 aaKnown RBP10.06□□□□□ -0.8
SHMT2-201ENST00000328923 WDR74Q6RFH5 385 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-201ENST00000328923 C12orf54Q6X4T0 127 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 OR10G6Q8NH81 332 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 MRAP2Q96G30 205 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 WDR61Q9GZS3 305 aaKnown RBP10.06□□□□□ -0.8
SHMT2-201ENST00000328923 SLC39A9Q9NUM3 307 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 MCTS1Q9ULC4 181 aaKnown RBP10.06□□□□□ -0.8
SHMT2-201ENST00000328923 TDRD6O60522 2096 aaKnown RBP10.06□□□□□ -0.8
SHMT2-201ENST00000328923 A0A0G2JMM0 328 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 A0A1W2PPB8 328 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 KIR3DP1A8MWS1 328 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 C2CD4DB7Z1M9 353 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 KLRC4-KLRK1H3BQV0 150 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 CHST1O43916 411 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 CLPSP04118 112 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 SMIM17P0DL12 118 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 CCNOP22674 350 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 BLVRBP30043 206 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-201ENST00000328923 OTX2P32243 289 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 ZNF90Q03938 601 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 GABRA6Q16445 453 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 SCGB1C1Q8TD33 95 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 TMEM204Q9BSN7 226 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 HINT2Q9BX68 163 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 PBOV1Q9GZY1 135 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 OR10A2Q9H208 303 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 PRTFDC1Q9NRG1 225 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 SPAG17Q6Q759 2223 aa10.06□□□□□ -0.8
SHMT2-201ENST00000328923 LOC102725191A0A1B0GVB3 256 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 NPIPB13A6NJU9 1138 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 FOXI3A8MTJ6 420 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-201ENST00000328923 NPIPB4C9JG80 1138 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 TGFBR3Q03167 851 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 LTC4SQ16873 150 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 ASCL4Q6XD76 172 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 OR5AS1Q8N127 324 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 PERPQ96FX8 193 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 A0A087X0K7 114 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 SAA2-SAA4A0A096LPE2 208 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 K7EP34 96 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 IGKV1D-33P01593 117 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 IGKV1-33P01594 117 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 CLEC3BP05452 202 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 SERPINE2P07093 398 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 PVRP15151 417 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 THBS3P49746 956 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 TMEM249Q2WGJ8 235 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 RNFT1Q5M7Z0 435 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 SPATA31B1PQ5VZV4 182 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 C19orf35Q6ZS72 473 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 SPATA12Q7Z6I5 190 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 NEIL1Q96FI4 390 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-201ENST00000328923 BMFQ96LC9 184 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 FER1L6-AS2Q96M78 137 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 C19orf24Q9BVV8 132 aa10.05□□□□□ -0.8
SHMT2-201ENST00000328923 ADAM20O43506 726 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 PAGE4O60829 102 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 NPY1RP25929 384 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 SSTR5P35346 364 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 PAX9P55771 341 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 CD300EQ496F6 205 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-201ENST00000328923 PLCXD3Q63HM9 321 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 ZNF324BQ6AW86 544 aaPredicted RBP10.04□□□□□ -0.8
SHMT2-201ENST00000328923 TSKUQ8WUA8 353 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 SLC25A22Q9H936 323 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 TRBV7-9A0A0J9YWB2 115 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 CGAP01215 116 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 PGCP20142 388 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 SRD5A2P31213 254 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 RHOBP62745 196 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 PET117Q6UWS5 81 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 RD3Q7Z3Z2 195 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 LINC00346Q8IVM7 164 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 UEVLDQ8IX04 471 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 RPP25LQ8N5L8 163 aaKnown RBP10.04□□□□□ -0.8
SHMT2-201ENST00000328923 SSC4DQ8WTU2 575 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 NINJ1Q92982 152 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 GP6Q9HCN6 339 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 CRIM1Q9NZV1 1036 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 PSG8Q9UQ74 426 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 SHANK1Q9Y566 2161 aa10.04□□□□□ -0.8
SHMT2-201ENST00000328923 A0A1B0GW15 77 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 A0A1W2PQD3 144 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 NPIPA5E9PKD4 350 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 NPIPA3F8WFD2 350 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 CRYAAP02489 173 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 REG1AP05451 166 aa10.03□□□□□ -0.8
SHMT2-201ENST00000328923 LINC00869P0C866 280 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms