RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 ASPHD2Q6ICH7 369 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 BMPERQ8N8U9 685 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 C9orf106Q8NAJ2 232 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 GGACTQ9BVM4 153 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 TEX50A0A1B0GTY4 177 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 P2RY4P51582 365 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 RNASEKQ6P5S7 137 aaKnown RBP9.73□□□□□ -0.85
COL4A5-201ENST00000328300 TMEM252Q8N6L7 170 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 STARD4Q96DR4 205 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 SULT1A2P50226 295 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 SRSF7Q16629 238 aaKnown RBP eCLIP9.73□□□□□ -0.85
COL4A5-201ENST00000328300 PQLC2Q6ZP29 291 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 C16orf82Q7Z2V1 217 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 ARID1BQ8NFD5 2236 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-201ENST00000328300 TRAV34A0A0B4J273 112 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 LMX1BO60663 402 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 KBTBD11O94819 623 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 AWAT1Q58HT5 328 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 OR10G8Q8NGN5 311 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 BET1LQ9NYM9 111 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 ZFC3H1O60293 1989 aaKnown RBP9.73□□□□□ -0.85
COL4A5-201ENST00000328300 CEACAM18A8MTB9 384 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 RAMP1O60894 148 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 IGHV3-13P01766 116 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 IGHV3-7P01780 117 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 DLK1P80370 383 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 SMUG1Q53HV7 270 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 BLNKQ8WV28 456 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 TMEM190Q8WZ59 177 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 MRPL32Q9BYC8 188 aaKnown RBP9.73□□□□□ -0.85
COL4A5-201ENST00000328300 TMEM140Q9NV12 185 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 LINC00312Q9Y6C7 94 aa9.73□□□□□ -0.85
COL4A5-201ENST00000328300 A0A1B0GTI1 187 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 KIAA1324LA8MWY0 1029 aaPredicted RBP9.72□□□□□ -0.85
COL4A5-201ENST00000328300 MFAP4P55083 255 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 DSCR9P59020 149 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 FAM209BQ5JX69 171 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 CBLN2Q8IUK8 224 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 FGFRL1Q8N441 504 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 MTCL1Q9Y4B5 1905 aaKnown RBP9.72□□□□□ -0.85
COL4A5-201ENST00000328300 A0A1W2PRD5 423 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 A0A1W2PRF3 423 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 A0A1W2PRM7 423 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 BMPR1BO00238 502 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 WNT9BO14905 357 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 TCAPO15273 167 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 ATP6V0CP27449 155 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 LHFPL5Q8TAF8 219 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 A0A1W2PP11 408 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 C17orf100A8MU93 164 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 FCN1O00602 326 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 Q1RN00 199 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 GLRX5Q86SX6 157 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 QTRT1Q9BXR0 403 aaKnown RBP9.72□□□□□ -0.85
COL4A5-201ENST00000328300 PLSCR4Q9NRQ2 329 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 URB1O60287 2271 aaKnown RBP9.72□□□□□ -0.85
COL4A5-201ENST00000328300 TMEM187Q14656 261 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 ECSCRQ19T08 205 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 IZUMO4Q1ZYL8 232 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 DYNLRB2Q8TF09 96 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 FAM222BQ8WU58 562 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 GALNT14Q96FL9 552 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 RBKSQ9H477 322 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 TRAV39A0A0B4J263 110 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 LBHQ53QV2 105 aaPredicted RBP9.72□□□□□ -0.85
COL4A5-201ENST00000328300 DOK5Q9P104 306 aa9.72□□□□□ -0.85
COL4A5-201ENST00000328300 DEPPQ9NTK1 212 aa9.71□□□□□ -0.85
COL4A5-201ENST00000328300 CBLN4Q9NTU7 201 aa9.71□□□□□ -0.85
COL4A5-201ENST00000328300 GREB1Q4ZG55 1949 aa9.71□□□□□ -0.85
COL4A5-201ENST00000328300 TSC2P49815 1807 aa9.71□□□□□ -0.85
COL4A5-201ENST00000328300 P01737 135 aa9.71□□□□□ -0.85
COL4A5-201ENST00000328300 RPL30P62888 115 aaKnown RBP9.71□□□□□ -0.85
COL4A5-201ENST00000328300 PSG9Q00887 426 aa9.71□□□□□ -0.85
COL4A5-201ENST00000328300 GPR146Q96CH1 333 aa9.71□□□□□ -0.85
COL4A5-201ENST00000328300 METTL26Q96S19 204 aa9.71□□□□□ -0.85
COL4A5-201ENST00000328300 PAXXQ9BUH6 204 aa9.71□□□□□ -0.85
COL4A5-201ENST00000328300 MARCH11A6NNE9 402 aa9.71□□□□□ -0.86
COL4A5-201ENST00000328300 ZNF385CQ66K41 422 aaPredicted RBP9.71□□□□□ -0.86
COL4A5-201ENST00000328300 FAM169BQ8N8A8 192 aa9.71□□□□□ -0.86
COL4A5-201ENST00000328300 ELOVL1Q9BW60 279 aa9.71□□□□□ -0.86
COL4A5-201ENST00000328300 MPZP25189 248 aa9.71□□□□□ -0.86
COL4A5-201ENST00000328300 TNFRSF9Q07011 255 aa9.71□□□□□ -0.86
COL4A5-201ENST00000328300 BSPH1Q075Z2 132 aa9.71□□□□□ -0.86
COL4A5-201ENST00000328300 MDS2Q8NDY4 140 aa9.71□□□□□ -0.86
COL4A5-201ENST00000328300 KNL1Q8NG31 2342 aa9.71□□□□□ -0.86
COL4A5-201ENST00000328300 ELF5Q9UKW6 265 aaPredicted RBP9.71□□□□□ -0.86
COL4A5-201ENST00000328300 MED19A0JLT2 244 aaPredicted RBP9.71□□□□□ -0.86
COL4A5-201ENST00000328300 HELTA6NFD8 242 aa9.71□□□□□ -0.86
COL4A5-201ENST00000328300 J3QRE1 110 aa9.71□□□□□ -0.86
COL4A5-201ENST00000328300 SNCGO76070 127 aa9.71□□□□□ -0.86
COL4A5-201ENST00000328300 CLPSP04118 112 aa9.71□□□□□ -0.86
COL4A5-201ENST00000328300 ACAA1P09110 424 aaPredicted RBP9.71□□□□□ -0.86
COL4A5-201ENST00000328300 RGP1Q92546 391 aaPredicted RBP9.71□□□□□ -0.86
COL4A5-201ENST00000328300 PACRGQ96M98 296 aaPredicted RBP9.71□□□□□ -0.86
COL4A5-201ENST00000328300 RELQ04864 619 aaPredicted RBP9.7□□□□□ -0.86
COL4A5-201ENST00000328300 FAM27E3Q08E93 113 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 TBR1Q16650 682 aa9.7□□□□□ -0.86
COL4A5-201ENST00000328300 PSMG3Q9BT73 122 aaPredicted RBP9.7□□□□□ -0.86
COL4A5-201ENST00000328300 MEX3AA1L020 520 aaKnown RBP9.7□□□□□ -0.86
COL4A5-201ENST00000328300 NPIPB11E5RHQ5 1161 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms