RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 BTLAQ7Z6A9 289 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 LCTP09848 1927 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 ZNF205O95201 554 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 TMEM144Q7Z5S9 345 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 OR4C3Q8NH37 302 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 PRSS47A8MTI9 375 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 CD1AP06126 327 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 DYNLT3P51808 116 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 OR4D11Q8NGI4 311 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 PLSCR2Q9NRY7 297 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 NGFP01138 241 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 GZMHP20718 246 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 CEACAM6P40199 344 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 HYAL1Q12794 435 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 TMEM155Q4W5P6 130 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 ALKBH3Q96Q83 286 aaPredicted RBP8.51□□□□□ -1.05
COL12A1-201ENST00000322507 METTL12A8MUP2 240 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 EMDP50402 254 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 C4orf45Q96LM5 186 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 IFNL4K9M1U5 179 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 HIKESHIQ53FT3 197 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 SLC6A13Q9NSD5 602 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 HDHD3Q9BSH5 251 aaPredicted RBP8.51□□□□□ -1.05
COL12A1-201ENST00000322507 CREBBPQ92793 2442 aa8.51□□□□□ -1.05
COL12A1-201ENST00000322507 A0A0G2JLM5 398 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.5□□□□□ -1.05
COL12A1-201ENST00000322507 INAFM2P0DMQ5 153 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 MEIG1Q5JSS6 88 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 DCAF10Q5QP82 559 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 C9orf50Q5SZB4 431 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 CXXC4Q9H2H0 198 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 HOXD4P09016 255 aaPredicted RBP8.5□□□□□ -1.05
COL12A1-201ENST00000322507 NPC2P61916 151 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 LOC389332A0A1B0GUA5 103 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 PNLIPP16233 465 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 PLNP26678 52 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 FOXF1Q12946 379 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 FAM53AQ6NSI3 398 aaPredicted RBP8.5□□□□□ -1.05
COL12A1-201ENST00000322507 IGHV1-69-2A0A0G2JMI3 117 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 OR4D5Q8NGN0 318 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 GGTLC1Q9BX51 225 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 VN1R1Q9GZP7 353 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 PRDM13Q9H4Q3 707 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 LY75O60449 1722 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 ABCA4P78363 2273 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 PKDREJQ9NTG1 2253 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 A0A1W2PNR3 127 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 COL9A2Q14055 689 aaPredicted RBP8.5□□□□□ -1.05
COL12A1-201ENST00000322507 MOB3BQ86TA1 216 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 TBL2Q9Y4P3 447 aaKnown RBP8.5□□□□□ -1.05
COL12A1-201ENST00000322507 KIR3DL3Q8N743 410 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 WFDC5Q8TCV5 224 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 TMEM190Q8WZ59 177 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 ZFP64Q9NPA5 681 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 TRAV9-2A0A087WT02 112 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 FAM157BP0CG42 384 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 ZNF788Q6ZQV5 615 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 RTP5Q14D33 572 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 RFLNAQ6ZTI6 216 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 FOXC2Q99958 501 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 A0A096LPE4 126 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 A0A1W2PPZ6 126 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 GFRALQ6UXV0 394 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 SLC25A40Q8TBP6 338 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 LRRC61Q9BV99 259 aa8.5□□□□□ -1.05
COL12A1-201ENST00000322507 NXT2Q9NPJ8 142 aaKnown RBP8.5□□□□□ -1.05
COL12A1-201ENST00000322507 CISD1Q9NZ45 108 aaKnown RBP8.5□□□□□ -1.05
COL12A1-201ENST00000322507 ARHGAP5-AS1Q96IT6 56 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 PPIAL4EA0A075B759 164 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 CXCL13O43927 109 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 PPIAL4FP0DN26 164 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 HIST1H4AP62805 103 aaKnown RBP8.49□□□□□ -1.05
COL12A1-201ENST00000322507 ZNF750Q32MQ0 723 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 TMEM240Q5SV17 173 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 SOSTQ9BQB4 213 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 EPDR1Q9UM22 224 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 PPIAL4AQ9Y536 164 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 VENTXO95231 258 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 CFDP00746 253 aaPredicted RBP8.49□□□□□ -1.05
COL12A1-201ENST00000322507 IGHV3-9P01782 118 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 XAF1Q6GPH4 301 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 DNAJC30Q96LL9 226 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 WDR54Q9H977 334 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 VWC2LB2RUY7 222 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 LDLRAD3Q86YD5 345 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 PRR14Q9BWN1 585 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 CACNA1EQ15878 2313 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 B3GALT4O96024 378 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 OR4A8P0C604 315 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 PSG2P11465 335 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 FGF5P12034 268 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 MUC1P15941 1255 aaPredicted RBP8.49□□□□□ -1.05
COL12A1-201ENST00000322507 ID4P47928 161 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 ABHD1Q96SE0 405 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 SLC25A15Q9Y619 301 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 WDR38Q5JTN6 314 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 WDR13Q9H1Z4 485 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 LTB4R2Q9NPC1 389 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 NEU3Q9UQ49 428 aa8.49□□□□□ -1.05
COL12A1-201ENST00000322507 PRR14LQ5THK1 2151 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms