RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 OR52L2PQ8NGH6 319 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 OR10G8Q8NGN5 311 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 OR5B3Q8NH48 314 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 TUBD1Q9UJT1 453 aa13.05□□□□□ -0.32
VARS2-201ENST00000321897 SP1P08047 785 aa13.04□□□□□ -0.32
VARS2-201ENST00000321897 ZNF818PQ6ZRF7 136 aa13.04□□□□□ -0.32
VARS2-201ENST00000321897 DMRTC2Q8IXT2 367 aaPredicted RBP13.04□□□□□ -0.32
VARS2-201ENST00000321897 IMMP1LQ96LU5 166 aa13.04□□□□□ -0.32
VARS2-201ENST00000321897 PARLQ9H300 379 aa13.04□□□□□ -0.32
VARS2-201ENST00000321897 RIMS4Q9H426 269 aaPredicted RBP13.04□□□□□ -0.32
VARS2-201ENST00000321897 TLN1Q9Y490 2541 aaKnown RBP13.04□□□□□ -0.32
VARS2-201ENST00000321897 AMBPP02760 352 aa13.04□□□□□ -0.32
VARS2-201ENST00000321897 LBHQ53QV2 105 aaPredicted RBP13.04□□□□□ -0.32
VARS2-201ENST00000321897 UNQ6494/PRO21346Q6UXR6 183 aa13.04□□□□□ -0.32
VARS2-201ENST00000321897 FAM131CQ96AQ9 280 aa13.04□□□□□ -0.32
VARS2-201ENST00000321897 SMDT1Q9H4I9 107 aa13.04□□□□□ -0.32
VARS2-201ENST00000321897 DNAJC4Q9NNZ3 241 aa13.04□□□□□ -0.32
VARS2-201ENST00000321897 SELENOKQ9Y6D0 94 aa13.04□□□□□ -0.32
VARS2-201ENST00000321897 IGHMP01871 453 aa13.04□□□□□ -0.32
VARS2-201ENST00000321897 ICAM4Q14773 271 aa13.04□□□□□ -0.32
VARS2-201ENST00000321897 Q56UQ5 140 aa13.04□□□□□ -0.32
VARS2-201ENST00000321897 ARSJQ5FYB0 599 aaPredicted RBP13.04□□□□□ -0.32
VARS2-201ENST00000321897 TMEM222Q9H0R3 208 aa13.04□□□□□ -0.32
VARS2-201ENST00000321897 ANOS1P23352 680 aa13.03□□□□□ -0.32
VARS2-201ENST00000321897 TNFSF4P23510 183 aa13.03□□□□□ -0.32
VARS2-201ENST00000321897 TNFSF10P50591 281 aa13.03□□□□□ -0.32
VARS2-201ENST00000321897 SLC24A4Q8NFF2 622 aa13.03□□□□□ -0.32
VARS2-201ENST00000321897 RCC1LQ96I51 464 aaKnown RBP13.03□□□□□ -0.32
VARS2-201ENST00000321897 HPRT1P00492 218 aa13.03□□□□□ -0.32
VARS2-201ENST00000321897 CBLN1P23435 193 aa13.03□□□□□ -0.32
VARS2-201ENST00000321897 ZNF664Q8N3J9 261 aa13.03□□□□□ -0.32
VARS2-201ENST00000321897 LYRM2Q9NU23 88 aaPredicted RBP13.03□□□□□ -0.32
VARS2-201ENST00000321897 TECRQ9NZ01 308 aaKnown RBP13.03□□□□□ -0.32
VARS2-201ENST00000321897 M0QZK8 103 aa13.03□□□□□ -0.32
VARS2-201ENST00000321897 GGCTO75223 188 aaKnown RBP13.03□□□□□ -0.32
VARS2-201ENST00000321897 CELA3BP08861 270 aa13.03□□□□□ -0.32
VARS2-201ENST00000321897 OR4A8P0C604 315 aa13.03□□□□□ -0.32
VARS2-201ENST00000321897 DEFA4P12838 97 aa13.03□□□□□ -0.32
VARS2-201ENST00000321897 HOXA4Q00056 320 aaPredicted RBP13.03□□□□□ -0.32
VARS2-201ENST00000321897 RNPS1Q15287 305 aaKnown RBP13.03□□□□□ -0.32
VARS2-201ENST00000321897 BET1LQ9NYM9 111 aa13.03□□□□□ -0.32
VARS2-201ENST00000321897 RPL36A-HNRNPH2H7BZ11 118 aa13.03□□□□□ -0.32
VARS2-201ENST00000321897 RAB29O14966 203 aa13.03□□□□□ -0.32
VARS2-201ENST00000321897 OTX1P32242 354 aaPredicted RBP13.03□□□□□ -0.32
VARS2-201ENST00000321897 COL4A3Q01955 1670 aa13.03□□□□□ -0.32
VARS2-201ENST00000321897 TRBV6-7A0A0A0MS04 114 aa13.02□□□□□ -0.32
VARS2-201ENST00000321897 IGKV1-12A0A0C4DH73 117 aa13.02□□□□□ -0.32
VARS2-201ENST00000321897 TMEM30CPA0ZSE6 113 aa13.02□□□□□ -0.32
VARS2-201ENST00000321897 IGKV1D-12P01611 117 aa13.02□□□□□ -0.32
VARS2-201ENST00000321897 FBXW9Q5XUX1 488 aa13.02□□□□□ -0.32
VARS2-201ENST00000321897 DAZAP1Q96EP5 407 aaKnown RBP13.02□□□□□ -0.32
VARS2-201ENST00000321897 SRD5A3Q9H8P0 318 aa13.02□□□□□ -0.32
VARS2-201ENST00000321897 RALYQ9UKM9 306 aaKnown RBP13.02□□□□□ -0.32
VARS2-201ENST00000321897 ATP23Q9Y6H3 246 aa13.02□□□□□ -0.32
VARS2-201ENST00000321897 M0R296 226 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 OR1L6Q8NGR2 347 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 OR1L1Q8NH94 360 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 CCL17Q92583 94 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 MANBALQ9NQG1 85 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 PTPRQQ9UMZ3 2332 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 LOC102723971A0A1B0GUV8 181 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 K7N7A8 449 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 CEACAM1P13688 526 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 GNB1P62873 340 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 ZNF506Q5JVG8 444 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 TCF23Q7RTU1 214 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 GPR146Q96CH1 333 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 ACY3Q96HD9 319 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 RNF122Q9H9V4 155 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 OR2W1Q9Y3N9 320 aa13.02□□□□□ -0.33
VARS2-201ENST00000321897 TRAV38-1A0A0B4J264 116 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 JOSD1Q15040 202 aaPredicted RBP13.01□□□□□ -0.33
VARS2-201ENST00000321897 HLA-DRB5Q30154 266 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 S1PR3Q99500 378 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 DCTN5Q9BTE1 182 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 A0A1W2PRD5 423 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 A0A1W2PRF3 423 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 A0A1W2PRM7 423 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 PGPEP1LA6NFU8 196 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 HAND1O96004 215 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 HOXA6P31267 233 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 FAM201AQ5SY85 155 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 C17orf82Q86X59 251 aaPredicted RBP13.01□□□□□ -0.33
VARS2-201ENST00000321897 VKORC1L1Q8N0U8 176 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 ZIC4Q8N9L1 334 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 ZPBPQ9BS86 351 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 DECR2Q9NUI1 292 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 IGLV3-12A0A075B6K2 115 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 TMEM11P17152 192 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 CHRNB4P30926 498 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 PTGDSP41222 190 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 RAB7AP51149 207 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 SMIM21Q3B7S5 101 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 TMEM211Q6ICI0 200 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 MOGAT3Q86VF5 341 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 TCTEX1D1Q8N7M0 179 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 RND1Q92730 232 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 WNT10AQ9GZT5 417 aa13.01□□□□□ -0.33
VARS2-201ENST00000321897 REG1BP48304 166 aa13□□□□□ -0.33
VARS2-201ENST00000321897 UCP3P55916 312 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms