RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 RAB29O14966 203 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 MMP9P14780 707 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 C12orf57Q99622 126 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 AURKAIP1Q9NWT8 199 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-201ENST00000314191 TUBD1Q9UJT1 453 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 MYLKQ15746 1914 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 SPINK4O60575 86 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 TMEM11P17152 192 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 RND3P61587 244 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 LSM10Q969L4 123 aaKnown RBP5.22□□□□□ -1.57
PRKDC-201ENST00000314191 RAB1BQ9H0U4 201 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 SH2D2AQ9NP31 389 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 DKK1O94907 266 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 MDKP21741 143 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-201ENST00000314191 OR10J1P30954 320 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 KIR2DS2P43631 304 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 CYTL1Q9NRR1 136 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 PSPNO60542 156 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 UCNP55089 124 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 ZNF66Q6ZN08 573 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 SPSB4Q96A44 273 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 DANCRP0C864 163 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 ZNF880Q6PDB4 577 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 WDR82Q6UXN9 313 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 S100A7AQ86SG5 101 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 LRP11Q86VZ4 500 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 STARD4Q96DR4 205 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 ZDBF2Q9HCK1 2354 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 MARCH11A6NNE9 402 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 PGA5P0DJD9 388 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 CEACAM3P40198 252 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 BPIFB3P59826 476 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 TNFRSF9Q07011 255 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 ZDHHC16Q969W1 377 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 FAM210BQ96KR6 192 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 OR51B2Q9Y5P1 312 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 TMEM56-RWDD3S4R434 201 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 B2MP61769 119 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 C1orf162Q8NEQ5 155 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-201ENST00000314191 MRPL37Q9BZE1 423 aaKnown RBP5.22□□□□□ -1.57
PRKDC-201ENST00000314191 SLC45A2Q9UMX9 530 aa5.22□□□□□ -1.57
PRKDC-201ENST00000314191 FABP9Q0Z7S8 132 aa5.21□□□□□ -1.57
PRKDC-201ENST00000314191 NCMAPQ5T1S8 102 aa5.21□□□□□ -1.57
PRKDC-201ENST00000314191 VSTM2AQ8TAG5 236 aa5.21□□□□□ -1.57
PRKDC-201ENST00000314191 GTF3AQ92664 365 aaKnown RBP5.21□□□□□ -1.57
PRKDC-201ENST00000314191 IL22RA2Q969J5 263 aa5.21□□□□□ -1.57
PRKDC-201ENST00000314191 ZDHHC11Q9H8X9 412 aa5.21□□□□□ -1.57
PRKDC-201ENST00000314191 TMEM140Q9NV12 185 aa5.21□□□□□ -1.57
PRKDC-201ENST00000314191 PXMP4Q9Y6I8 212 aa5.21□□□□□ -1.57
PRKDC-201ENST00000314191 COL4A4P53420 1690 aaPredicted RBP5.21□□□□□ -1.57
PRKDC-201ENST00000314191 ATRAIDQ6UW56 229 aa5.21□□□□□ -1.57
PRKDC-201ENST00000314191 FAM57AQ8TBR7 257 aa5.21□□□□□ -1.57
PRKDC-201ENST00000314191 RNF138Q8WVD3 245 aa5.21□□□□□ -1.57
PRKDC-201ENST00000314191 LURAP1Q96LR2 239 aa5.21□□□□□ -1.57
PRKDC-201ENST00000314191 GNB4Q9HAV0 340 aa5.21□□□□□ -1.57
PRKDC-201ENST00000314191 VAX2Q9UIW0 290 aa5.21□□□□□ -1.57
PRKDC-201ENST00000314191 CREBBPQ92793 2442 aa5.21□□□□□ -1.57
PRKDC-201ENST00000314191 MYO16Q9Y6X6 1858 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 SPCS3P61009 180 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 PSG5Q15238 335 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 MIC13Q5XKP0 118 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 TMPRSS3P57727 454 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 DTX1Q86Y01 620 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 ZNF331Q9NQX6 463 aaPredicted RBP5.21□□□□□ -1.58
PRKDC-201ENST00000314191 TCF19Q9Y242 345 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 GPR6P46095 362 aaPredicted RBP5.21□□□□□ -1.58
PRKDC-201ENST00000314191 RAB13P51153 203 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 MRGPRGQ86SM5 289 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 QTRT1Q9BXR0 403 aaKnown RBP5.21□□□□□ -1.58
PRKDC-201ENST00000314191 RHOBP62745 196 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 CRIM1Q9NZV1 1036 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 CTXND1A0A1B0GTU2 59 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 K7N7A8 449 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 RPRMLQ8N4K4 120 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 ASCL4Q6XD76 172 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 SLC35E3Q7Z769 313 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 NAT8Q9UHE5 227 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 TGOLN2O43493 480 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 IGHG3P01860 377 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 ZNF324BQ6AW86 544 aaPredicted RBP5.21□□□□□ -1.58
PRKDC-201ENST00000314191 ASCL5Q7RTU5 278 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 SLC16A13Q7RTY0 426 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 CYB561D1Q8N8Q1 229 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 C11orf94C9JXX5 98 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 SMIM15Q7Z3B0 74 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 WDR31Q8NA23 367 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 BLNKQ8WV28 456 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 UBTD1Q9HAC8 227 aa5.21□□□□□ -1.58
PRKDC-201ENST00000314191 KBTBD11O94819 623 aa5.2□□□□□ -1.58
PRKDC-201ENST00000314191 WT1P19544 449 aaPredicted RBP5.2□□□□□ -1.58
PRKDC-201ENST00000314191 SRSF3P84103 164 aaKnown RBP5.2□□□□□ -1.58
PRKDC-201ENST00000314191 FAM216AQ8WUB2 273 aa5.2□□□□□ -1.58
PRKDC-201ENST00000314191 BORCS7Q96B45 105 aa5.2□□□□□ -1.58
PRKDC-201ENST00000314191 BTF3L4Q96K17 158 aa5.2□□□□□ -1.58
PRKDC-201ENST00000314191 DIRC2Q96SL1 478 aa5.2□□□□□ -1.58
PRKDC-201ENST00000314191 TDRD15B5MCY1 1934 aaKnown RBP5.2□□□□□ -1.58
PRKDC-201ENST00000314191 IGHV1-69-2A0A0G2JMI3 117 aa5.2□□□□□ -1.58
PRKDC-201ENST00000314191 SCGB1D1O95968 90 aa5.2□□□□□ -1.58
PRKDC-201ENST00000314191 HSPE1P61604 102 aaKnown RBP5.2□□□□□ -1.58
PRKDC-201ENST00000314191 COTL1Q14019 142 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms