RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 MMP7P09237 267 aaPredicted RBP9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 NAT1P18440 290 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 CD40P25942 277 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 UBE2L3P68036 154 aaKnown RBP9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 TNFRSF9Q07011 255 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 OR4P4Q8NGL7 312 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 FAM210BQ96KR6 192 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 SMDT1Q9H4I9 107 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 RNF115Q9Y4L5 304 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 KCNMB2Q9Y691 235 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 IGKV1-12A0A0C4DH73 117 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 NDUFA2O43678 99 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 PAGE4O60829 102 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 F12P00748 615 aaPredicted RBP9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 IGKV1D-12P01611 117 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 UCP1P25874 307 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 LEAP2Q969E1 77 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 LURAP1Q96LR2 239 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 GINS3Q9BRX5 216 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 SCNM1Q9BWG6 230 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 HEATR1Q9H583 2144 aaKnown RBP9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 TRAV14DV4A0A0A6YYC5 116 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 H3BQ15 152 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 MPZP25189 248 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 GALR1P47211 349 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 GNG4P50150 75 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 LY6G6FQ5SQ64 297 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 MYPOPQ86VE0 399 aaPredicted RBP9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 OR4C12Q96R67 309 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 RNF2Q99496 336 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 NPVFQ9HCQ7 196 aa9.69□□□□□ -0.86
PCDHGC3-201ENST00000308177 PGA5P0DJD9 388 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 RND3P61587 244 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 GUCA2BQ16661 112 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 ZNF439Q8NDP4 499 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 MRPL30Q8TCC3 161 aaKnown RBP9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 IGKV1D-8A0A087WSZ0 117 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 RNF222A6NCQ9 220 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 SLC25A5P05141 298 aaKnown RBP9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 FAM87AP0C7U9 286 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 BRS3P32247 399 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 GPR6P46095 362 aaPredicted RBP9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 DLK1P80370 383 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 PSG5Q15238 335 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 MDS2Q8NDY4 140 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 RNF24Q9Y225 148 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 TOX4O94842 621 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 ZNF596Q8TC21 504 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 BLNKQ8WV28 456 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 TAF15Q92804 592 aaKnown RBP eCLIP9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 NDFIP1Q9BT67 221 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 PROB1E7EW31 1015 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 CHEK1O14757 476 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 OR4F17Q8NGA8 305 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 TMEM37Q8WXS4 190 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 TMEM140Q9NV12 185 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 FER1L5A0AVI2 2057 aa9.68□□□□□ -0.86
PCDHGC3-201ENST00000308177 ZNF729A6NN14 1252 aaPredicted RBP9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 SIGLEC5O15389 551 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 OTX1P32242 354 aaPredicted RBP9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 MMDQ15546 238 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 BSCL2Q96G97 398 aaPredicted RBP9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 AP1S3Q96PC3 154 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 ZG16O60844 167 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 BCL2P10415 239 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 MC5RP33032 325 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 WNT5AP41221 380 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 LYZP61626 148 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 SNRPEP62304 92 aaKnown RBP9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 C1RLQ9NZP8 487 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 KIF26AQ9ULI4 1882 aaPredicted RBP9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 DEFA6Q01524 100 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 BATFQ16520 125 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 RNF144BQ7Z419 303 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 PUSL1Q8N0Z8 303 aaKnown RBP9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 OR1B1Q8NGR6 318 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 AAMDCQ9H7C9 122 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 GAR1Q9NY12 217 aaKnown RBP9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 C2orf16Q68DN1 1984 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 C20orf202A1L168 122 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 B4DEV8 164 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 MPDU1O75352 247 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 SRSF10O75494 262 aaKnown RBP9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 APELAP0DMC3 54 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 ERVFRD-1P60508 538 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 HIST1H3AP68431 136 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 KLRB1Q12918 225 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 FAM201AQ5SY85 155 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 DOLPP1Q86YN1 238 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 GTF3AQ92664 365 aaKnown RBP9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 SMIM8Q96KF7 97 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 C12orf57Q99622 126 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 SH3BGRL3Q9H299 93 aa9.67□□□□□ -0.86
PCDHGC3-201ENST00000308177 IGKV1-27A0A075B6S5 117 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 IGHV3-72A0A0B4J1Y9 119 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 RNF212Q495C1 297 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 CYB561D1Q8N8Q1 229 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 OR13A1Q8NGR1 328 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 PLPPR1Q8TBJ4 325 aa9.66□□□□□ -0.86
PCDHGC3-201ENST00000308177 IL18BPO95998 194 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms