RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 SFTA3P0C7M3 94 aa7.22□□□□□ -1.25
PCDHB1-201ENST00000306549 CCL2P13500 99 aa7.22□□□□□ -1.25
PCDHB1-201ENST00000306549 PTGDSP41222 190 aa7.22□□□□□ -1.25
PCDHB1-201ENST00000306549 CLDN20P56880 219 aa7.22□□□□□ -1.25
PCDHB1-201ENST00000306549 OR8B12Q8NGG6 310 aa7.22□□□□□ -1.25
PCDHB1-201ENST00000306549 FAM216AQ8WUB2 273 aa7.22□□□□□ -1.25
PCDHB1-201ENST00000306549 RAB24Q969Q5 203 aa7.22□□□□□ -1.25
PCDHB1-201ENST00000306549 PRKNO60260 465 aaPredicted RBP7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 PMELP40967 661 aa7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 RPL24P83731 157 aaKnown RBP7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 ST3GAL2Q16842 350 aa7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 ZNF770Q6IQ21 691 aaPredicted RBP7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 FAM90A1Q86YD7 464 aa7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 SGMS2Q8NHU3 365 aa7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 FOXJ2Q9P0K8 574 aa7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 SEMA5BQ9P283 1151 aa7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 LOC390937A0A1W2PQ73 354 aa7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 LMX1BO60663 402 aa7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 GCSAMQ8N6F7 178 aa7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 SSC4DQ8WTU2 575 aa7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 WDR89Q96FK6 387 aaPredicted RBP7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 PRELID3AQ96N28 172 aa7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 AUNIPQ9H7T9 357 aa7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 RALYQ9UKM9 306 aaKnown RBP7.21□□□□□ -1.25
PCDHB1-201ENST00000306549 ASPDHA6ND91 283 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 IGHV3-13P01766 116 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 IGHV3-7P01780 117 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 ISG15P05161 165 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 FABP5Q01469 135 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 CEACAM21Q3KPI0 293 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 BPIFA4PQ86YQ2 179 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 BVESQ8NE79 360 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 IGLV3-32A0A0A0MS00 114 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 C11orf94C9JXX5 98 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 PRSS23O95084 383 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 RPS20P60866 119 aaKnown RBP7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 FMODQ06828 376 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 MEIG1Q5JSS6 88 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 AQP10Q96PS8 301 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 J3QR06 171 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 ADRA2AP08913 450 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 OR5AC1P0C628 307 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 ATP5IP56385 69 aaPredicted RBP7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 RPS4XP62701 263 aaKnown RBP7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 ATP5G2Q06055 141 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 PMS2P11Q13670 270 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 SAMD13Q5VXD3 122 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 OR8G5Q8NG78 346 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 COL25A1Q9BXS0 654 aaPredicted RBP7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 IGKV3D-11A0A0A0MRZ8 115 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 CDIPTO14735 213 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 OR8A1Q8NGG7 326 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 OR51B2Q9Y5P1 312 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 TIMP3P35625 211 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 RPL27AP46776 148 aaKnown RBP7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 SLC25A53Q5H9E4 307 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 C16orf47Q6ZP98 133 aaPredicted RBP7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 LHFPL5Q8TAF8 219 aa7.21□□□□□ -1.26
PCDHB1-201ENST00000306549 HIVEP2P31629 2446 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 hCG_38984A0A1B0GV85 526 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 TMEM189A5PLL7 270 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 SELENOTP62341 195 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 HLA-DRB5Q30154 266 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 OR4B1Q8NGF8 309 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 TMEM140Q9NV12 185 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 MGST3O14880 152 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 PSG9Q00887 426 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 FAAP20Q6NZ36 180 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 NAA50Q9GZZ1 169 aaKnown RBP7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 TINAGQ9UJW2 476 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 TMEM272A0A1B0GTI8 110 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 OR4C46A6NHA9 309 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 NPFFO15130 113 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 ZNF253O75346 499 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 C10orf128Q5T292 105 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 TSPO2Q5TGU0 170 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 ISG20L2Q9H9L3 353 aaKnown RBP7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 FFAR1O14842 300 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 RBFOX2O43251 390 aaKnown RBP eCLIP7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 HLA-DRB3P79483 266 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 UNQ5815/PRO19632Q6UWF5 114 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 PRNTQ86SH4 94 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 MRPS18BQ9Y676 258 aaKnown RBP7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 H7C1H1 209 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 OGG1O15527 345 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 NDUFB6O95139 128 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 FAM157CP0CG43 387 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 PDCD1Q15116 288 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 KCNK17Q96T54 332 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 GPR61Q9BZJ8 451 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 PLEKHB1Q9UF11 243 aaPredicted RBP7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 IL17BQ9UHF5 180 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 ELOA3CA0A087WX78 387 aaPredicted RBP7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 TM4SF5O14894 197 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 CLLU1Q5K131 121 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 SLC35E3Q7Z769 313 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 TMEM179BQ7Z7N9 219 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 OR2D3Q8NGH3 330 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 ORAI1Q96D31 301 aa7.2□□□□□ -1.26
PCDHB1-201ENST00000306549 LPAR5Q9H1C0 372 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms