RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 TIMM9Q9Y5J7 89 aa12.69□□□□□ -0.38
CSDC2-201ENST00000306149 OR5H1A6NKK0 313 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 SSTR5P35346 364 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 TGFBR3Q03167 851 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 WDR25Q64LD2 544 aaPredicted RBP12.68□□□□□ -0.38
CSDC2-201ENST00000306149 C11orf53Q8IXP5 236 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 LHX4Q969G2 390 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 PRDM13Q9H4Q3 707 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 ZDHHC11Q9H8X9 412 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 DMXL1Q9Y485 3027 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 TMEM30CPA0ZSE6 113 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 ODAMA1E959 279 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 IQCF6A8MYZ5 107 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 HIST1H1BP16401 226 aaKnown RBP12.68□□□□□ -0.38
CSDC2-201ENST00000306149 CD81P60033 236 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 GABRA6Q16445 453 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 ALKBH2Q6NS38 261 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 ZNF645Q8N7E2 425 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 COQ2Q96H96 371 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 SLC25A22Q9H936 323 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 SLC39A9Q9NUM3 307 aa12.68□□□□□ -0.38
CSDC2-201ENST00000306149 ZG16O60844 167 aa12.67□□□□□ -0.38
CSDC2-201ENST00000306149 RBMXL2O75526 392 aaKnown RBP12.67□□□□□ -0.38
CSDC2-201ENST00000306149 CCL11P51671 97 aa12.67□□□□□ -0.38
CSDC2-201ENST00000306149 C9orf152Q5JTZ5 239 aa12.67□□□□□ -0.38
CSDC2-201ENST00000306149 ACSM6Q6P461 480 aa12.67□□□□□ -0.38
CSDC2-201ENST00000306149 VWA1Q6PCB0 445 aa12.67□□□□□ -0.38
CSDC2-201ENST00000306149 GATAD1Q8WUU5 269 aa12.67□□□□□ -0.38
CSDC2-201ENST00000306149 RNF212BA8MTL3 300 aa12.67□□□□□ -0.38
CSDC2-201ENST00000306149 NKX2-8O15522 239 aa12.67□□□□□ -0.38
CSDC2-201ENST00000306149 ZNF737O75373 536 aa12.67□□□□□ -0.38
CSDC2-201ENST00000306149 TMEM14EPQ6UXP3 125 aa12.67□□□□□ -0.38
CSDC2-201ENST00000306149 CENPVQ7Z7K6 275 aaPredicted RBP12.67□□□□□ -0.38
CSDC2-201ENST00000306149 GFOD1Q9NXC2 390 aa12.67□□□□□ -0.38
CSDC2-201ENST00000306149 NAT8Q9UHE5 227 aa12.67□□□□□ -0.38
CSDC2-201ENST00000306149 CYP2G1PQ6ZSU1 146 aa12.66□□□□□ -0.38
CSDC2-201ENST00000306149 SMG1Q96Q15 3661 aaKnown RBP12.66□□□□□ -0.38
CSDC2-201ENST00000306149 IGHV3-13P01766 116 aa12.66□□□□□ -0.38
CSDC2-201ENST00000306149 IGHV3-7P01780 117 aa12.66□□□□□ -0.38
CSDC2-201ENST00000306149 TNFSF10P50591 281 aa12.66□□□□□ -0.38
CSDC2-201ENST00000306149 PLA2G2CQ5R387 149 aa12.66□□□□□ -0.38
CSDC2-201ENST00000306149 FAM214BQ7L5A3 538 aa12.66□□□□□ -0.38
CSDC2-201ENST00000306149 TMEM178AQ8NBL3 297 aa12.66□□□□□ -0.38
CSDC2-201ENST00000306149 ST8SIA5O15466 376 aa12.65□□□□□ -0.38
CSDC2-201ENST00000306149 CACNA1GO43497 2377 aa12.65□□□□□ -0.38
CSDC2-201ENST00000306149 MEF2BQ02080 365 aaPredicted RBP12.65□□□□□ -0.38
CSDC2-201ENST00000306149 TFF3Q07654 80 aa12.65□□□□□ -0.38
CSDC2-201ENST00000306149 MGAQ8IWI9 3026 aa12.65□□□□□ -0.38
CSDC2-201ENST00000306149 OR13A1Q8NGR1 328 aa12.65□□□□□ -0.38
CSDC2-201ENST00000306149 NINJ1Q92982 152 aa12.65□□□□□ -0.38
CSDC2-201ENST00000306149 HSPB7Q9UBY9 170 aa12.65□□□□□ -0.38
CSDC2-201ENST00000306149 LRRC30A6NM36 301 aa12.65□□□□□ -0.38
CSDC2-201ENST00000306149 LINC00473A8K010 186 aa12.65□□□□□ -0.38
CSDC2-201ENST00000306149 TIMM8AO60220 97 aaPredicted RBP12.65□□□□□ -0.38
CSDC2-201ENST00000306149 EDDM3AQ14507 147 aa12.65□□□□□ -0.38
CSDC2-201ENST00000306149 NCR3LG1Q68D85 454 aa12.65□□□□□ -0.38
CSDC2-201ENST00000306149 RPUSD4Q96CM3 377 aaKnown RBP12.65□□□□□ -0.38
CSDC2-201ENST00000306149 SMIM7Q9BQ49 75 aa12.65□□□□□ -0.38
CSDC2-201ENST00000306149 HES4Q9HCC6 221 aa12.65□□□□□ -0.38
CSDC2-201ENST00000306149 PITPNC1Q9UKF7 332 aa12.65□□□□□ -0.38
CSDC2-201ENST00000306149 KBTBD11O94819 623 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 SELLP14151 372 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 FABP4P15090 132 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 DEFA6Q01524 100 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 COL10A1Q03692 680 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 FOXF2Q12947 444 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 CLEC12BQ2HXU8 276 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 Q3ZCU0 254 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 WDR82Q6UXN9 313 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 ACP7Q6ZNF0 438 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 Q6ZT83 130 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 NECAP1Q8NC96 275 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 OR10A7Q8NGE5 316 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 CLCF1Q9UBD9 225 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 PSG11Q9UQ72 335 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 OOEPA6NGQ2 149 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 M0R296 226 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 ADIRFQ15847 76 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 FDCSPQ8NFU4 85 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 PYGO2Q9BRQ0 406 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 SRD5A3Q9H8P0 318 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.64□□□□□ -0.39
CSDC2-201ENST00000306149 TMEM250H0YL14 139 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 J3QW42 95 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 P0C879 139 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 FGF7P21781 194 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 WDR31Q8NA23 367 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 C9orf106Q8NAJ2 232 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 DTD1Q8TEA8 209 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 SNX22Q96L94 193 aa12.64□□□□□ -0.39
CSDC2-201ENST00000306149 TMEM210A6NLX4 147 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 BMP5P22003 454 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 KIR2DL2P43627 348 aaPredicted RBP12.63□□□□□ -0.39
CSDC2-201ENST00000306149 EIF4EBP1Q13541 118 aaPredicted RBP12.63□□□□□ -0.39
CSDC2-201ENST00000306149 MSMO1Q15800 293 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 TMEM241Q24JQ0 296 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 SLC35E4Q6ICL7 350 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 INO80CQ6PI98 192 aaPredicted RBP12.63□□□□□ -0.39
CSDC2-201ENST00000306149 ZBTB34Q8NCN2 500 aa12.63□□□□□ -0.39
CSDC2-201ENST00000306149 PACRGQ96M98 296 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms