RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 WASHC3Q9Y3C0 194 aa13.96□□□□□ -0.17
BRD3-201ENST00000303407 HIST1H1BP16401 226 aaKnown RBP13.96□□□□□ -0.17
BRD3-201ENST00000303407 SRP14P37108 136 aaKnown RBP13.96□□□□□ -0.17
BRD3-201ENST00000303407 Q6ZT83 130 aa13.96□□□□□ -0.17
BRD3-201ENST00000303407 DRAM1Q8N682 238 aa13.96□□□□□ -0.17
BRD3-201ENST00000303407 C5orf17Q8NAS9 161 aa13.96□□□□□ -0.17
BRD3-201ENST00000303407 TRAV34A0A0B4J273 112 aa13.96□□□□□ -0.18
BRD3-201ENST00000303407 DNASE2O00115 360 aaPredicted RBP13.96□□□□□ -0.18
BRD3-201ENST00000303407 ZNF883P0CG24 379 aa13.96□□□□□ -0.18
BRD3-201ENST00000303407 MIC13Q5XKP0 118 aa13.96□□□□□ -0.18
BRD3-201ENST00000303407 ZNF596Q8TC21 504 aa13.96□□□□□ -0.18
BRD3-201ENST00000303407 C1QTNF5Q9BXJ0 243 aa13.96□□□□□ -0.18
BRD3-201ENST00000303407 CISD1Q9NZ45 108 aaKnown RBP13.96□□□□□ -0.18
BRD3-201ENST00000303407 DLL1O00548 723 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 ECSCRQ19T08 205 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 RPL29P47914 159 aaKnown RBP13.95□□□□□ -0.18
BRD3-201ENST00000303407 ARTNQ5T4W7 220 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 C19orf35Q6ZS72 473 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 SMIM8Q96KF7 97 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 PCGF1Q9BSM1 259 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 J3QW42 95 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 WNT9BO14905 357 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 UCNP55089 124 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 SFXN3Q9BWM7 321 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 MRPL13Q9BYD1 178 aaKnown RBP13.95□□□□□ -0.18
BRD3-201ENST00000303407 SSTR5P35346 364 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 FHITP49789 147 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 MEF2BQ02080 365 aaPredicted RBP13.95□□□□□ -0.18
BRD3-201ENST00000303407 HIST1H1EP10412 219 aaKnown RBP13.95□□□□□ -0.18
BRD3-201ENST00000303407 RND3P61587 244 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 RIGQ13278 110 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 GFI1Q99684 422 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 METTL1Q9UBP6 276 aaKnown RBP13.95□□□□□ -0.18
BRD3-201ENST00000303407 HILPDAQ9Y5L2 63 aa13.95□□□□□ -0.18
BRD3-201ENST00000303407 H0YL77 283 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 RPL27AP46776 148 aaKnown RBP13.94□□□□□ -0.18
BRD3-201ENST00000303407 FAM3BP58499 235 aaPredicted RBP13.94□□□□□ -0.18
BRD3-201ENST00000303407 RPL8P62917 257 aaKnown RBP13.94□□□□□ -0.18
BRD3-201ENST00000303407 CALHM1Q8IU99 346 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 SLC25A28Q96A46 364 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 RHOVQ96L33 236 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 P2RX4Q99571 388 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 UFC1Q9Y3C8 167 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 F5H697 171 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 HYPMO75409 117 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 RHBDL1O75783 438 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 MC5RP33032 325 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 VKORC1L1Q8N0U8 176 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 OR5AU1Q8NGC0 362 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 SLC35E4Q6ICL7 350 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 CCDC144NLQ6NUI1 221 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 LPAR2Q9HBW0 351 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 CNTRLQ7Z7A1 2325 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 VWA1Q6PCB0 445 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 OR2D3Q8NGH3 330 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 LYZL4Q96KX0 146 aa13.94□□□□□ -0.18
BRD3-201ENST00000303407 VWA8A3KMH1 1905 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 EIF3GO75821 320 aaKnown RBP eCLIP13.93□□□□□ -0.18
BRD3-201ENST00000303407 GPR6P46095 362 aaPredicted RBP13.93□□□□□ -0.18
BRD3-201ENST00000303407 NRN1LQ496H8 165 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 PRNTQ86SH4 94 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 OR8I2Q8N0Y5 310 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 OR5R1Q8NH85 324 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 ELOBQ15370 118 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 SGMS2Q8NHU3 365 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 QTRT1Q9BXR0 403 aaKnown RBP13.93□□□□□ -0.18
BRD3-201ENST00000303407 SNRPCP09234 159 aaKnown RBP13.93□□□□□ -0.18
BRD3-201ENST00000303407 SHISA5Q8N114 240 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 POM121Q96HA1 1249 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 MESP1Q9BRJ9 268 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 ASCC3Q8N3C0 2202 aaKnown RBP13.93□□□□□ -0.18
BRD3-201ENST00000303407 TGIF2-C20orf24A0A0A6YYL0 155 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 MSGN1A6NI15 193 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 ORM1P02763 201 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 TMPRSS3P57727 454 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 TMEM97Q5BJF2 176 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 C1QTNF12Q5T7M4 302 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 HCP5Q6MZN7 132 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 LOC102723996A0A087X1L8 192 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 IGLV3-32A0A0A0MS00 114 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 CFHR1Q03591 330 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 GP6Q9HCN6 339 aa13.93□□□□□ -0.18
BRD3-201ENST00000303407 TRAV14DV4A0A0A6YYC5 116 aa13.92□□□□□ -0.18
BRD3-201ENST00000303407 ISLRO14498 428 aa13.92□□□□□ -0.18
BRD3-201ENST00000303407 LINC00869P0C866 280 aa13.92□□□□□ -0.18
BRD3-201ENST00000303407 GBGT1Q8N5D6 347 aa13.92□□□□□ -0.18
BRD3-201ENST00000303407 STARD4Q96DR4 205 aa13.92□□□□□ -0.18
BRD3-201ENST00000303407 MRPS18CQ9Y3D5 142 aaKnown RBP13.92□□□□□ -0.18
BRD3-201ENST00000303407 CBY1Q9Y3M2 126 aa13.92□□□□□ -0.18
BRD3-201ENST00000303407 KCNMB2Q9Y691 235 aa13.92□□□□□ -0.18
BRD3-201ENST00000303407 A0A087X0M5 115 aa13.92□□□□□ -0.18
BRD3-201ENST00000303407 A0A1B0GX30 115 aa13.92□□□□□ -0.18
BRD3-201ENST00000303407 MIOXQ9UGB7 285 aa13.92□□□□□ -0.18
BRD3-201ENST00000303407 TRGC2P03986 189 aa13.92□□□□□ -0.18
BRD3-201ENST00000303407 ABLIM2Q6H8Q1 611 aa13.92□□□□□ -0.18
BRD3-201ENST00000303407 ACP7Q6ZNF0 438 aa13.92□□□□□ -0.18
BRD3-201ENST00000303407 GSX1Q9H4S2 264 aaPredicted RBP13.92□□□□□ -0.18
BRD3-201ENST00000303407 MPTX1A8MV57 137 aa13.92□□□□□ -0.18
BRD3-201ENST00000303407 J3KRW8 73 aa13.92□□□□□ -0.18
BRD3-201ENST00000303407 NPIPB7O75200 414 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms