RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 NDUFS6O75380 124 aaKnown RBP11.98□□□□□ -0.49
SHCBP1-201ENST00000303383 CGB3P0DN86 165 aa11.98□□□□□ -0.49
SHCBP1-201ENST00000303383 CGB7P0DN87 165 aa11.98□□□□□ -0.49
SHCBP1-201ENST00000303383 MRPS11P82912 194 aaKnown RBP11.98□□□□□ -0.49
SHCBP1-201ENST00000303383 ID3Q02535 119 aa11.98□□□□□ -0.49
SHCBP1-201ENST00000303383 ZNF273Q14593 569 aa11.98□□□□□ -0.49
SHCBP1-201ENST00000303383 DMBX1Q8NFW5 382 aa11.98□□□□□ -0.49
SHCBP1-201ENST00000303383 LINC00473A8K010 186 aa11.98□□□□□ -0.49
SHCBP1-201ENST00000303383 ERVK-16P61578 105 aa11.98□□□□□ -0.49
SHCBP1-201ENST00000303383 SLC31A2O15432 143 aa11.98□□□□□ -0.49
SHCBP1-201ENST00000303383 NMBP08949 121 aa11.98□□□□□ -0.49
SHCBP1-201ENST00000303383 CCL3L1P16619 93 aa11.98□□□□□ -0.49
SHCBP1-201ENST00000303383 DUTP33316 252 aaKnown RBP11.98□□□□□ -0.49
SHCBP1-201ENST00000303383 ZNF134P52741 427 aa11.98□□□□□ -0.49
SHCBP1-201ENST00000303383 SPTAN1Q13813 2472 aaKnown RBP11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 DAOP14920 347 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 LINC00205P59089 165 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 NHLH2Q02577 135 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 AVPI1Q5T686 147 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 NCR3LG1Q68D85 454 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 STX12Q86Y82 276 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 RAB40CQ96S21 281 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 IFI27L2Q9H2X8 130 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 UBTD1Q9HAC8 227 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 CYTL1Q9NRR1 136 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 RPUSD1Q9UJJ7 312 aaKnown RBP11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 HCFC1P51610 2035 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 PPIHO43447 177 aaKnown RBP11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 FBXO24O75426 580 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 EWSR1Q01844 656 aaKnown RBP eCLIP11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 CT45A1Q5HYN5 189 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 TCF23Q7RTU1 214 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 CT45A3Q8NHU0 189 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 MARC2Q969Z3 335 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 NARFLQ9H6Q4 476 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 SESN1Q9Y6P5 492 aa11.97□□□□□ -0.49
SHCBP1-201ENST00000303383 H3BP45 60 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 ITGB1BP1O14713 200 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 SYNGR2O43760 224 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 IAPPP10997 89 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 MMP9P14780 707 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 LOXP28300 417 aaPredicted RBP11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 CLINT1Q14677 625 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 MAJINQ3KP22 176 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 TMEM200BQ69YZ2 307 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 Q6ZRM9 215 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 RAB1CQ92928 201 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 R3HDM4Q96D70 268 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 LYRM2Q9NU23 88 aaPredicted RBP11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 KAAG1Q9UBP8 84 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 DSCAML1Q8TD84 2053 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 SSX9Q7RTT3 188 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 TMEM217Q8N7C4 229 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 FAM212BQ9NTI7 297 aaPredicted RBP11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 CTSZQ9UBR2 303 aa11.96□□□□□ -0.49
SHCBP1-201ENST00000303383 MED6O75586 246 aa11.96□□□□□ -0.5
SHCBP1-201ENST00000303383 CST7O76096 145 aa11.96□□□□□ -0.5
SHCBP1-201ENST00000303383 KIR2DS2P43631 304 aa11.96□□□□□ -0.5
SHCBP1-201ENST00000303383 SLC25A24Q6NUK1 477 aa11.96□□□□□ -0.5
SHCBP1-201ENST00000303383 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.96□□□□□ -0.5
SHCBP1-201ENST00000303383 LRRC20Q8TCA0 184 aa11.96□□□□□ -0.5
SHCBP1-201ENST00000303383 RNF141Q8WVD5 230 aa11.96□□□□□ -0.5
SHCBP1-201ENST00000303383 CXorf58Q96LI9 332 aa11.96□□□□□ -0.5
SHCBP1-201ENST00000303383 KALRNO60229 2985 aa11.96□□□□□ -0.5
SHCBP1-201ENST00000303383 SAA2-SAA4A0A096LPE2 208 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 LEUTXA8MZ59 168 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 TOR1AO14656 332 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 MMP23AO75900 390 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 HPRT1P00492 218 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 SAA2P0DJI9 122 aaPredicted RBP11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 TMEM252Q8N6L7 170 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 NEU4Q8WWR8 484 aaPredicted RBP11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 RELNP78509 3460 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 MARCH11A6NNE9 402 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 GAPDHP04406 335 aaKnown RBP11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 SOD3P08294 240 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 EIF4EBP1Q13541 118 aaPredicted RBP11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 HEPN1Q6WQI6 88 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 OR10A7Q8NGE5 316 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 ADTRPQ96IZ2 230 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 PSENENQ9NZ42 101 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 TEX46H3BTG2 121 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 I3L521 148 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 PITX3O75364 302 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 LY6HO94772 140 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 RRASP10301 218 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 THBS3P49746 956 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 SSTP61278 116 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 ZNF266Q14584 549 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 OR4S2Q8NH73 311 aa11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 RALYQ9UKM9 306 aaKnown RBP11.95□□□□□ -0.5
SHCBP1-201ENST00000303383 DOCK11Q5JSL3 2073 aa11.94□□□□□ -0.5
SHCBP1-201ENST00000303383 ERVFRD-1P60508 538 aa11.94□□□□□ -0.5
SHCBP1-201ENST00000303383 OR8B3Q8NGG8 313 aa11.94□□□□□ -0.5
SHCBP1-201ENST00000303383 OR10X1Q8NGY0 326 aa11.94□□□□□ -0.5
SHCBP1-201ENST00000303383 OR8B2Q96RD0 313 aa11.94□□□□□ -0.5
SHCBP1-201ENST00000303383 A0A1W2PPH5 198 aa11.94□□□□□ -0.5
SHCBP1-201ENST00000303383 IGSF23A1L1A6 192 aa11.94□□□□□ -0.5
SHCBP1-201ENST00000303383 BAXQ07812 192 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms