RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 HSD17B10Q99714 261 aaKnown RBP12.23□□□□□ -0.45
UBXN1-202ENST00000301935 PARP12Q9H0J9 701 aaKnown RBP12.23□□□□□ -0.45
UBXN1-202ENST00000301935 CCL28Q9NRJ3 127 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 DPM3Q9P2X0 92 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 RNF150Q9ULK6 438 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 VSIG4Q9Y279 399 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 KCNIP3Q9Y2W7 256 aa12.23□□□□□ -0.45
UBXN1-202ENST00000301935 INMT-MINDY4F8WBC2 141 aa12.22□□□□□ -0.45
UBXN1-202ENST00000301935 RNASEK-C17orf49H0YIS7 233 aa12.22□□□□□ -0.45
UBXN1-202ENST00000301935 ARPC1BO15143 372 aaKnown RBP12.22□□□□□ -0.45
UBXN1-202ENST00000301935 SLC31A2O15432 143 aa12.22□□□□□ -0.45
UBXN1-202ENST00000301935 IGHV3-7P01780 117 aa12.22□□□□□ -0.45
UBXN1-202ENST00000301935 ARG1P05089 322 aa12.22□□□□□ -0.45
UBXN1-202ENST00000301935 MDKP21741 143 aaPredicted RBP12.22□□□□□ -0.45
UBXN1-202ENST00000301935 CATR1Q13166 79 aa12.22□□□□□ -0.45
UBXN1-202ENST00000301935 HCP5Q6MZN7 132 aa12.22□□□□□ -0.45
UBXN1-202ENST00000301935 FAM53AQ6NSI3 398 aaPredicted RBP12.22□□□□□ -0.45
UBXN1-202ENST00000301935 ZNF818PQ6ZRF7 136 aa12.22□□□□□ -0.45
UBXN1-202ENST00000301935 DRAM1Q8N682 238 aa12.22□□□□□ -0.45
UBXN1-202ENST00000301935 LHX4Q969G2 390 aa12.22□□□□□ -0.45
UBXN1-202ENST00000301935 ABHD14BQ96IU4 210 aa12.22□□□□□ -0.45
UBXN1-202ENST00000301935 RTBDNQ9BSG5 229 aaPredicted RBP12.22□□□□□ -0.45
UBXN1-202ENST00000301935 C5orf66Q9H5L9 145 aa12.22□□□□□ -0.45
UBXN1-202ENST00000301935 SLC2A9Q9NRM0 540 aa12.22□□□□□ -0.45
UBXN1-202ENST00000301935 FAM212BQ9NTI7 297 aaPredicted RBP12.22□□□□□ -0.45
UBXN1-202ENST00000301935 IGHV3OR16-10A0A075B7F0 116 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 TRAV40A0A0B4J280 105 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 IGHV1-69DA0A0B4J2H0 117 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 CENPVL3A0A0U1RRI6 287 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 HSD17B6O14756 317 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 IGHV1-69P01742 117 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 GAPDHP04406 335 aaKnown RBP12.21□□□□□ -0.45
UBXN1-202ENST00000301935 IL5P05113 134 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 ARHGDIBP52566 201 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 PIGPP57054 158 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 CCDC144NLQ6NUI1 221 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 ZNF833PQ6ZTB9 187 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 LDLRAD3Q86YD5 345 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 SGPP2Q8IWX5 399 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 OR4P4Q8NGL7 312 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 RTN4IP1Q8WWV3 396 aaPredicted RBP12.21□□□□□ -0.45
UBXN1-202ENST00000301935 ST6GALNAC6Q969X2 333 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 MALSU1Q96EH3 234 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 SDHAF2Q9NX18 166 aa12.21□□□□□ -0.45
UBXN1-202ENST00000301935 SOX21Q9Y651 276 aaPredicted RBP12.21□□□□□ -0.45
UBXN1-202ENST00000301935 PRKDCP78527 4128 aaKnown RBP12.2□□□□□ -0.46
UBXN1-202ENST00000301935 TRAV6A0A075B6T7 132 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 SAA2-SAA4A0A096LPE2 208 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 TEX13DA0A0J9YY54 714 aaPredicted RBP12.2□□□□□ -0.46
UBXN1-202ENST00000301935 A0A1W2PPE3 182 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 LY6LH3BQJ8 138 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 NPFFO15130 113 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 MPPED1O15442 326 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 PGLYRP1O75594 196 aaPredicted RBP12.2□□□□□ -0.46
UBXN1-202ENST00000301935 IGLV2-14P01704 120 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 SAA2P0DJI9 122 aaPredicted RBP12.2□□□□□ -0.46
UBXN1-202ENST00000301935 ANXA3P12429 323 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 AKR1C4P17516 323 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 KIR2DS2P43631 304 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 THBS3P49746 956 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 DHODHQ02127 395 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 ZNF816Q0VGE8 651 aaPredicted RBP12.2□□□□□ -0.46
UBXN1-202ENST00000301935 UTF1Q5T230 341 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 TMED4Q7Z7H5 227 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 ODF3L1Q8IXM7 274 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 OR8H3Q8N146 312 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 CD300LFQ8TDQ1 290 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 RPEQ96AT9 228 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 GPN1Q9HCN4 374 aaPredicted RBP12.2□□□□□ -0.46
UBXN1-202ENST00000301935 FLVCR2Q9UPI3 526 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 PRELID3BQ9Y3B1 194 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 MMP24Q9Y5R2 645 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 TGP01266 2768 aa12.2□□□□□ -0.46
UBXN1-202ENST00000301935 MDFIC2A0A1B0GVS7 189 aa12.19□□□□□ -0.46
UBXN1-202ENST00000301935 CRYM-AS1A6NIL9 109 aa12.19□□□□□ -0.46
UBXN1-202ENST00000301935 M0R1X1 148 aa12.19□□□□□ -0.46
UBXN1-202ENST00000301935 OR4E1P0C645 316 aa12.19□□□□□ -0.46
UBXN1-202ENST00000301935 RRASP10301 218 aa12.19□□□□□ -0.46
UBXN1-202ENST00000301935 SPNP16150 400 aa12.19□□□□□ -0.46
UBXN1-202ENST00000301935 F2RP25116 425 aa12.19□□□□□ -0.46
UBXN1-202ENST00000301935 KLRD1Q13241 179 aa12.19□□□□□ -0.46
UBXN1-202ENST00000301935 PHLDA2Q53GA4 152 aa12.19□□□□□ -0.46
UBXN1-202ENST00000301935 TGIF2LXQ8IUE1 241 aa12.19□□□□□ -0.46
UBXN1-202ENST00000301935 GALNT14Q96FL9 552 aa12.19□□□□□ -0.46
UBXN1-202ENST00000301935 ZNF251Q9BRH9 671 aa12.19□□□□□ -0.46
UBXN1-202ENST00000301935 NAA60Q9H7X0 242 aa12.19□□□□□ -0.46
UBXN1-202ENST00000301935 LIN7CQ9NUP9 197 aaKnown RBP12.19□□□□□ -0.46
UBXN1-202ENST00000301935 SNRPGP15A8MWD9 76 aa12.18□□□□□ -0.46
UBXN1-202ENST00000301935 HOXA3O43365 443 aaPredicted RBP12.18□□□□□ -0.46
UBXN1-202ENST00000301935 PI3P19957 117 aa12.18□□□□□ -0.46
UBXN1-202ENST00000301935 MC5RP33032 325 aa12.18□□□□□ -0.46
UBXN1-202ENST00000301935 DUTP33316 252 aaKnown RBP12.18□□□□□ -0.46
UBXN1-202ENST00000301935 SRPXP78539 464 aa12.18□□□□□ -0.46
UBXN1-202ENST00000301935 CBX3Q13185 183 aa12.18□□□□□ -0.46
UBXN1-202ENST00000301935 EIF4EBP1Q13541 118 aaPredicted RBP12.18□□□□□ -0.46
UBXN1-202ENST00000301935 C4orf46Q504U0 113 aa12.18□□□□□ -0.46
UBXN1-202ENST00000301935 TPTE2P1Q5T6R2 138 aa12.18□□□□□ -0.46
UBXN1-202ENST00000301935 TBC1D26Q86UD7 250 aa12.18□□□□□ -0.46
UBXN1-202ENST00000301935 ADAD2Q8NCV1 583 aaKnown RBP12.18□□□□□ -0.46
UBXN1-202ENST00000301935 WFDC12Q8WWY7 111 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms