RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 A0A1B0GU03 582 aa10.66□□□□□ -0.7
ABCA3-201ENST00000301732 PSG4Q00888 419 aa10.66□□□□□ -0.7
ABCA3-201ENST00000301732 TMEM78Q5T7P6 136 aa10.66□□□□□ -0.7
ABCA3-201ENST00000301732 TCFL5Q9UL49 500 aa10.66□□□□□ -0.7
ABCA3-201ENST00000301732 MPC1Q9Y5U8 109 aa10.66□□□□□ -0.7
ABCA3-201ENST00000301732 CD300LDQ6UXZ3 194 aa10.66□□□□□ -0.7
ABCA3-201ENST00000301732 FNDC4Q9H6D8 234 aaPredicted RBP10.66□□□□□ -0.7
ABCA3-201ENST00000301732 UQCR10Q9UDW1 63 aa10.66□□□□□ -0.7
ABCA3-201ENST00000301732 IGLV3-16A0A075B6K0 115 aa10.66□□□□□ -0.7
ABCA3-201ENST00000301732 S1PR2O95136 353 aa10.66□□□□□ -0.7
ABCA3-201ENST00000301732 CD160O95971 181 aa10.66□□□□□ -0.7
ABCA3-201ENST00000301732 SEC11BP0C7V7 166 aa10.66□□□□□ -0.7
ABCA3-201ENST00000301732 TRIP6Q15654 476 aaKnown RBP10.66□□□□□ -0.7
ABCA3-201ENST00000301732 MRAP2Q96G30 205 aa10.66□□□□□ -0.7
ABCA3-201ENST00000301732 ZPBPQ9BS86 351 aa10.66□□□□□ -0.7
ABCA3-201ENST00000301732 OR51M1Q9H341 326 aa10.66□□□□□ -0.7
ABCA3-201ENST00000301732 IGHV4-39P01824 125 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 ANOS1P23352 680 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 MEF2BQ02080 365 aaPredicted RBP10.65□□□□□ -0.7
ABCA3-201ENST00000301732 ATP1A1-AS1Q5TC04 95 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 HOGA1Q86XE5 327 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 RNASEH2CQ8TDP1 164 aaKnown RBP10.65□□□□□ -0.7
ABCA3-201ENST00000301732 HIST1H2BAQ96A08 127 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 MEGF9Q9H1U4 602 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 PRNDQ9UKY0 176 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 RGPD1P0DJD0 1748 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 SPEM1Q8N4L4 309 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 CHRNA10Q9GZZ6 450 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 RBFOX2O43251 390 aaKnown RBP eCLIP10.65□□□□□ -0.7
ABCA3-201ENST00000301732 GATA2P23769 480 aaPredicted RBP10.65□□□□□ -0.7
ABCA3-201ENST00000301732 FUT5Q11128 374 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 DEGS2Q6QHC5 323 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 TIMP4Q99727 224 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 LINC00587B1AMM8 73 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 NPC2P61916 151 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 C10orf126Q8N4M7 172 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 APOBEC4Q8WW27 367 aaKnown RBP10.65□□□□□ -0.7
ABCA3-201ENST00000301732 NPVFQ9HCQ7 196 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 TOMM7Q9P0U1 55 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 WIPI2Q9Y4P8 454 aa10.65□□□□□ -0.7
ABCA3-201ENST00000301732 AKAP6Q13023 2319 aa10.65□□□□□ -0.71
ABCA3-201ENST00000301732 SAA1P0DJI8 122 aaPredicted RBP10.65□□□□□ -0.71
ABCA3-201ENST00000301732 GALP22466 123 aa10.65□□□□□ -0.71
ABCA3-201ENST00000301732 KCNMB1Q16558 191 aa10.65□□□□□ -0.71
ABCA3-201ENST00000301732 FGFRL1Q8N441 504 aa10.65□□□□□ -0.71
ABCA3-201ENST00000301732 OR4A5Q8NH83 315 aa10.65□□□□□ -0.71
ABCA3-201ENST00000301732 VSTM2AQ8TAG5 236 aa10.65□□□□□ -0.71
ABCA3-201ENST00000301732 A0A1W2PPV9 198 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 PROB1E7EW31 1015 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 M0R381 172 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 TFF1P04155 84 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 ISG15P05161 165 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 UBALD2Q8IYN6 164 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 CDX2Q99626 313 aaPredicted RBP10.64□□□□□ -0.71
ABCA3-201ENST00000301732 PPP1R3EQ9H7J1 279 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 IGHV3-64A0A075B6Q5 118 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 ANKRD33Q7Z3H0 272 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 H1FOOQ8IZA3 346 aaPredicted RBP10.64□□□□□ -0.71
ABCA3-201ENST00000301732 OR5AN1Q8NGI8 311 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 GPBAR1Q8TDU6 330 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 WDR54Q9H977 334 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 ESPL1Q14674 2120 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 UNC13CQ8NB66 2214 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 A0A1B0GWB2 263 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 C2orf68Q2NKX9 166 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 FAM201AQ5SY85 155 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 C1orf122Q6ZSJ8 110 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 CACFD1Q9UGQ2 172 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 CACNA1IQ9P0X4 2223 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 CHD5Q8TDI0 1954 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 PGLYRP1O75594 196 aaPredicted RBP10.64□□□□□ -0.71
ABCA3-201ENST00000301732 COX6CP09669 75 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 P2RY6Q15077 328 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 ITLN1Q8WWA0 313 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 TAF15Q92804 592 aaKnown RBP eCLIP10.64□□□□□ -0.71
ABCA3-201ENST00000301732 SCN9AQ15858 1988 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 OR10J6PQ8NGY7 276 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 GLMPQ8WWB7 406 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 CHST5Q9GZS9 411 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 SCN8AQ9UQD0 1980 aa10.64□□□□□ -0.71
ABCA3-201ENST00000301732 A8MWL6 223 aa10.63□□□□□ -0.71
ABCA3-201ENST00000301732 NGFRP08138 427 aa10.63□□□□□ -0.71
ABCA3-201ENST00000301732 LHX8Q68G74 356 aa10.63□□□□□ -0.71
ABCA3-201ENST00000301732 QTRT1Q9BXR0 403 aaKnown RBP10.63□□□□□ -0.71
ABCA3-201ENST00000301732 SRSF3P84103 164 aaKnown RBP10.63□□□□□ -0.71
ABCA3-201ENST00000301732 ZNF818PQ6ZRF7 136 aa10.63□□□□□ -0.71
ABCA3-201ENST00000301732 GSN-AS1Q9NRJ2 163 aa10.63□□□□□ -0.71
ABCA3-201ENST00000301732 CCL27Q9Y4X3 112 aa10.63□□□□□ -0.71
ABCA3-201ENST00000301732 CRYBG1Q9Y4K1 1723 aa10.63□□□□□ -0.71
ABCA3-201ENST00000301732 THY1P04216 161 aa10.63□□□□□ -0.71
ABCA3-201ENST00000301732 SUMO2P61956 95 aaKnown RBP10.63□□□□□ -0.71
ABCA3-201ENST00000301732 GPR82Q96P67 336 aa10.63□□□□□ -0.71
ABCA3-201ENST00000301732 SSBP4Q9BWG4 385 aaPredicted RBP10.63□□□□□ -0.71
ABCA3-201ENST00000301732 NPFFR1Q9GZQ6 430 aa10.63□□□□□ -0.71
ABCA3-201ENST00000301732 SEC16AO15027 2179 aa10.63□□□□□ -0.71
ABCA3-201ENST00000301732 A0A0J9YW62 118 aa10.63□□□□□ -0.71
ABCA3-201ENST00000301732 IGHV5-10-1A0A0J9YXX1 117 aa10.63□□□□□ -0.71
ABCA3-201ENST00000301732 FCARP24071 287 aa10.63□□□□□ -0.71
ABCA3-201ENST00000301732 CDCP2Q5VXM1 449 aa10.63□□□□□ -0.71
ABCA3-201ENST00000301732 TMEM211Q6ICI0 200 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms