RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 OR10P1Q8NGE3 313 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 OR10G8Q8NGN5 311 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 TMEM54Q969K7 222 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 AKIRIN1Q9H9L7 192 aaPredicted RBP9.29□□□□□ -0.92
SNX20-201ENST00000300590 LAMTOR2Q9Y2Q5 125 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 TRBV20OR9-2A0A075B6H5 130 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 A0A096LPE4 126 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 A0A0J9YW62 118 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 A0A1W2PPZ6 126 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 ZG16O60844 167 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 SLC25A6P12236 298 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 PRDX4Q13162 271 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 HLA-DRB5Q30154 266 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 KRTCAP3Q53RY4 240 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 RIPPLY2Q5TAB7 128 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 C1orf53Q5VUE5 145 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 OCC1Q8TAD7 63 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 TBL2Q9Y4P3 447 aaKnown RBP9.29□□□□□ -0.92
SNX20-201ENST00000300590 COL6A3P12111 3177 aa9.29□□□□□ -0.92
SNX20-201ENST00000300590 VENTXO95231 258 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 LHX2P50458 406 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 TCL1AP56279 114 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 UBE2NP61088 152 aaKnown RBP9.28□□□□□ -0.92
SNX20-201ENST00000300590 SELENOTP62341 195 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 ZNF585BQ52M93 769 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 ZNF324BQ6AW86 544 aaPredicted RBP9.28□□□□□ -0.92
SNX20-201ENST00000300590 FAM53AQ6NSI3 398 aaPredicted RBP9.28□□□□□ -0.92
SNX20-201ENST00000300590 TMEM144Q7Z5S9 345 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 ZNF738Q8NE65 137 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 ZNF586Q9NXT0 402 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 CD207Q9UJ71 328 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 IGHV1OR21-1A0A087WYE8 117 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 CTXN2P0C2S0 81 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 RPL19P84098 196 aaKnown RBP9.28□□□□□ -0.92
SNX20-201ENST00000300590 SLC25A53Q5H9E4 307 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 TMEM42Q69YG0 159 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 ZNF596Q8TC21 504 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 SPACA9Q96E40 222 aaPredicted RBP9.28□□□□□ -0.92
SNX20-201ENST00000300590 NUDT11Q96G61 164 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 SRXN1Q9BYN0 137 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 SCO2A0A1W2PP80 73 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 RAMP3O60896 148 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 TDGF1P13385 188 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 OTX2P32243 289 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 CLDN15P56746 228 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 AAED1Q7RTV5 226 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 YRDCQ86U90 279 aaKnown RBP9.28□□□□□ -0.92
SNX20-201ENST00000300590 PLXDC1Q8IUK5 500 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 IFI44Q8TCB0 444 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 LRFN3Q9BTN0 628 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 NPCDR1Q9BY65 106 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 NAT8BQ9UHF3 227 aa9.28□□□□□ -0.92
SNX20-201ENST00000300590 LINC00205P59089 165 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 HTD2P86397 168 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 LCN12Q6JVE5 192 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 OR5A2Q8NGI9 324 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 APOBEC3DQ96AK3 386 aaPredicted RBP9.27□□□□□ -0.93
SNX20-201ENST00000300590 FOXB1Q99853 325 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 FGF23Q9GZV9 251 aaPredicted RBP9.27□□□□□ -0.93
SNX20-201ENST00000300590 PCED1AQ9H1Q7 454 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 NRN1Q9NPD7 142 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 IL36GQ9NZH8 169 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 GDF9O60383 454 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 HYPMO75409 117 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 COMPP49747 757 aaPredicted RBP9.27□□□□□ -0.93
SNX20-201ENST00000300590 FGF12P61328 243 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 FOXL1Q12952 345 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 SAXO1Q8IYX7 474 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 OR8I2Q8N0Y5 310 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 TMEM147Q9BVK8 224 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 OR2H1Q9GZK4 316 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 GNB4Q9HAV0 340 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 FSCN3Q9NQT6 498 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 DEPPQ9NTK1 212 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 TMEM38BQ9NVV0 291 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 TRAPPC2LQ9UL33 140 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 DOCK10Q96BY6 2186 aa9.27□□□□□ -0.93
SNX20-201ENST00000300590 MLNRO43193 412 aa9.26□□□□□ -0.93
SNX20-201ENST00000300590 UBE2V1Q13404 147 aa9.26□□□□□ -0.93
SNX20-201ENST00000300590 PRR31Q5SQ13 230 aa9.26□□□□□ -0.93
SNX20-201ENST00000300590 C7orf61Q8IZ16 206 aa9.26□□□□□ -0.93
SNX20-201ENST00000300590 UHRF2Q96PU4 802 aa9.26□□□□□ -0.93
SNX20-201ENST00000300590 PRRC2CQ9Y520 2896 aaKnown RBP9.26□□□□□ -0.93
SNX20-201ENST00000300590 CCL3P10147 92 aa9.26□□□□□ -0.93
SNX20-201ENST00000300590 Q6ZSR3 168 aa9.26□□□□□ -0.93
SNX20-201ENST00000300590 MRPL21Q7Z2W9 205 aaKnown RBP9.26□□□□□ -0.93
SNX20-201ENST00000300590 OR4B1Q8NGF8 309 aa9.26□□□□□ -0.93
SNX20-201ENST00000300590 UQCR10Q9UDW1 63 aa9.26□□□□□ -0.93
SNX20-201ENST00000300590 LRP4O75096 1905 aa9.26□□□□□ -0.93
SNX20-201ENST00000300590 DUX1O43812 170 aa9.26□□□□□ -0.93
SNX20-201ENST00000300590 CIDEAO60543 219 aa9.26□□□□□ -0.93
SNX20-201ENST00000300590 ZNF253O75346 499 aa9.26□□□□□ -0.93
SNX20-201ENST00000300590 MRPS21P82921 87 aaKnown RBP9.26□□□□□ -0.93
SNX20-201ENST00000300590 ASPHD1Q5U4P2 390 aa9.26□□□□□ -0.93
SNX20-201ENST00000300590 RCHY1Q96PM5 261 aa9.26□□□□□ -0.93
SNX20-201ENST00000300590 C5orf49A4QMS7 147 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 CXCL13O43927 109 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 CA6P23280 308 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 FBLN7Q53RD9 439 aa9.25□□□□□ -0.93
SNX20-201ENST00000300590 TMEM14EPQ6UXP3 125 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms