RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 FAM74A7A6NL05 159 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 MOSP00540 346 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 EGR1P18146 543 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 APCDD1LQ8NCL9 501 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 QTRT1Q9BXR0 403 aaKnown RBP11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 TMEM222Q9H0R3 208 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 DLL3Q9NYJ7 618 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 SCGB1A1P11684 91 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ZNF385CQ66K41 422 aaPredicted RBP11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 H1FOOQ8IZA3 346 aaPredicted RBP11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 FGF11Q92914 225 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 FOXJ2Q9P0K8 574 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 FHITP49789 147 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 DLX6P56179 175 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 RAB24Q969Q5 203 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 KCNK17Q96T54 332 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 PPIAL4CA0A0B4J2A2 164 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 GRIFINA4D1Z8 144 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 WNT9BO14905 357 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 PPIAL4GP0DN37 164 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ANOS1P23352 680 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 SLC25A47Q6Q0C1 308 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ZNF818PQ6ZRF7 136 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 SRSF12Q8WXF0 261 aaKnown RBP11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 NRIP2Q9BQI9 281 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 BEX4Q9NWD9 120 aaPredicted RBP11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 ZNF107Q9UII5 783 aaPredicted RBP11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 KCNE5Q9UJ90 142 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 RAXQ9Y2V3 346 aa11.65□□□□□ -0.54
CHRFAM7A-201ENST00000299847 CXorf65A6NEN9 183 aa11.65□□□□□ -0.55
CHRFAM7A-201ENST00000299847 PRB4P10163 310 aaPredicted RBP11.65□□□□□ -0.55
CHRFAM7A-201ENST00000299847 CRYBB3P26998 211 aa11.65□□□□□ -0.55
CHRFAM7A-201ENST00000299847 HOXC8P31273 242 aa11.65□□□□□ -0.55
CHRFAM7A-201ENST00000299847 TMEM74BQ9NUR3 256 aa11.65□□□□□ -0.55
CHRFAM7A-201ENST00000299847 PHLDA3Q9Y5J5 127 aa11.65□□□□□ -0.55
CHRFAM7A-201ENST00000299847 A1L4Q6 167 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SYT8Q8NBV8 401 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 NINQ8N4C6 2090 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 TIAF1O95411 115 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 C1QTNF12Q5T7M4 302 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 KLF14Q8TD94 323 aaPredicted RBP11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SSBP3Q9BWW4 388 aaPredicted RBP11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 COL4A1P02462 1669 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 ZNF345Q14585 488 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 MBNL2Q5VZF2 373 aaKnown RBP11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 LSM10Q969L4 123 aaKnown RBP11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 TMEM56-RWDD3S4R434 201 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SCNM1Q9BWG6 230 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 IGHV3OR16-8A0A075B7F1 116 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 ZNF658BQ4V348 819 aaPredicted RBP11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 FAM209AQ5JX71 171 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 PNKDQ8N490 385 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 HIST1H4GQ99525 98 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 PIMREGQ9BSJ6 248 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 PARLQ9H300 379 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 FAM206AQ9NX38 181 aa11.64□□□□□ -0.55
CHRFAM7A-201ENST00000299847 DLEC1Q9Y238 1755 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 PRR33A8MZF0 331 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 GCM2O75603 506 aaPredicted RBP11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 RPL39P5Q59GN2 51 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 FAM201AQ5SY85 155 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 CCL19Q99731 98 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 RALYQ9UKM9 306 aaKnown RBP11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SHANK3Q9BYB0 1731 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 IGLV1-36A0A0B4J1U3 117 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SOD3P08294 240 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 COX6A1P12074 109 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 ZNF273Q14593 569 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 TAF15Q92804 592 aaKnown RBP eCLIP11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 AMY1AP04745 511 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SMIM6P0DI80 62 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 ZNF56Q15929 161 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 GCSAMQ8N6F7 178 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 SLC25A38Q96DW6 304 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 TMPRSS3P57727 454 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 DDB2Q92466 427 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 REPIN1Q9BWE0 567 aaKnown RBP11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 TMEM262E9PQX1 116 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 WISP3O95389 354 aaPredicted RBP11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 ATP5G2Q06055 141 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 Q5BKY6 102 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 DMRTA2Q96SC8 542 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 PPP1R3EQ9H7J1 279 aa11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 MRPS18AQ9NVS2 196 aaKnown RBP11.63□□□□□ -0.55
CHRFAM7A-201ENST00000299847 ARFGEF1Q9Y6D6 1849 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 ANKRD31Q8N7Z5 1873 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 CFDP00746 253 aaPredicted RBP11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 AQP3Q92482 292 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 DCTN5Q9BTE1 182 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 ZNF430Q9H8G1 570 aaPredicted RBP11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 TRBV5-5A0A0J9YX44 114 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 CA11O75493 328 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 ZNF660Q6AZW8 331 aaPredicted RBP11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 CALHM1Q8IU99 346 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 A8MWL6 223 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 GPX1P07203 203 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 CELA3AP09093 270 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 ZNRF1Q8ND25 227 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 HS3ST3B1Q9Y662 390 aa11.62□□□□□ -0.55
CHRFAM7A-201ENST00000299847 ODAMA1E959 279 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms