RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 COX7A1P24310 79 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 MEIG1Q5JSS6 88 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 CXCL13O43927 109 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 DEFB115Q30KQ5 88 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 PTPRQQ9UMZ3 2332 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 ODAMA1E959 279 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 ZP1P60852 638 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 EAF1Q96JC9 268 aaPredicted RBP10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 H3BTX0 84 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 KLKB1P03952 638 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 EGR1P18146 543 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 GEMIN7Q9H840 131 aaKnown RBP10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 IGLV3-10A0A075B6K4 115 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 MYF5P13349 255 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 CD38P28907 300 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 OR4D11Q8NGI4 311 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 ASB10Q8WXI3 467 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 G6PC2Q9NQR9 355 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 PLXND1Q9Y4D7 1925 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 EREGO14944 169 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 HYPMO75409 117 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 TTC9CQ8N5M4 171 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 FADS6Q8N9I5 356 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 ORAOV1Q8WV07 137 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 NEUROG1Q92886 237 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 SDHCQ99643 169 aaPredicted RBP10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 TMEM30AQ9NV96 361 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 CGB1A6NKQ9 187 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 FAM53AQ6NSI3 398 aaPredicted RBP10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 ZNF562Q6V9R5 426 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 PRTN3P24158 256 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 CXorf66Q5JRM2 361 aaPredicted RBP10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 DCAF12Q5T6F0 453 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 OR2K2Q8NGT1 345 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 KCNE4Q8WWG9 221 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 TMEM186Q96B77 213 aa10.23□□□□□ -0.77
SHROOM3-201ENST00000296043 HMGA2P52926 109 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 UBE2V1Q13404 147 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 GREB1LQ9C091 1923 aaPredicted RBP10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 PLPP3O14495 311 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 RNPS1Q15287 305 aaKnown RBP10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 FGF14Q92915 247 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 J3QR06 171 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 OR52E5Q8NH55 327 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 ABHD14BQ96IU4 210 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 C6orf106Q9H6K1 298 aaPredicted RBP10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 APOHP02749 345 aaPredicted RBP10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 CAMTA1Q9Y6Y1 1673 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 YBX1P67809 324 aaKnown RBP10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 SLC25A40Q8TBP6 338 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 ZNF48Q96MX3 618 aaPredicted RBP10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 KLRC4-KLRK1H3BQV0 150 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 SSPNQ14714 243 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 AMBPP02760 352 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 CCL5P13501 91 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 MC5RP33032 325 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 GPX4P36969 197 aaPredicted RBP10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 SLC37A2Q8TED4 501 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 WDYHV1Q96HA8 205 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 PRNDQ9UKY0 176 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 A0A0G2JLM5 398 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 VSIG8P0DPA2 414 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 RCC1LQ96I51 464 aaKnown RBP10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 TMEM170BQ5T4T1 132 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 SRSF12Q8WXF0 261 aaKnown RBP10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 NPFFR1Q9GZQ6 430 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 PLSCR2Q9NRY7 297 aa10.22□□□□□ -0.77
SHROOM3-201ENST00000296043 TMEM252Q8N6L7 170 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 PATE4P0C8F1 98 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 RBPJQ06330 500 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 ZNF585BQ52M93 769 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 TIMM23BQ5SRD1 257 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 PATE1Q8WXA2 126 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 TAF15Q92804 592 aaKnown RBP eCLIP10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 NPDC1Q9NQX5 325 aaPredicted RBP10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 HDGFL3Q9Y3E1 203 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 NCOA6Q14686 2063 aaPredicted RBP10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 CRYBB3P26998 211 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 ADMP35318 185 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 FAM78AQ5JUQ0 283 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 GPHA2Q96T91 129 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 TOGARAM1Q9Y4F4 1720 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 SLC25A30Q5SVS4 291 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 ZNF793Q6ZN11 406 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 MFRPQ9BY79 579 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 C5orf66Q9H5L9 145 aa10.21□□□□□ -0.77
SHROOM3-201ENST00000296043 IGKV3D-11A0A0A0MRZ8 115 aa10.21□□□□□ -0.78
SHROOM3-201ENST00000296043 IGKV3-11P04433 115 aa10.21□□□□□ -0.78
SHROOM3-201ENST00000296043 ALKAL1Q6UXT8 129 aa10.21□□□□□ -0.78
SHROOM3-201ENST00000296043 ADAMTSL5Q6ZMM2 481 aa10.21□□□□□ -0.78
SHROOM3-201ENST00000296043 ST6GALNAC2Q9UJ37 374 aa10.21□□□□□ -0.78
SHROOM3-201ENST00000296043 ZNF865P0CJ78 1059 aaPredicted RBP10.21□□□□□ -0.78
SHROOM3-201ENST00000296043 MRPS11P82912 194 aaKnown RBP10.21□□□□□ -0.78
SHROOM3-201ENST00000296043 PRSS27Q9BQR3 290 aa10.21□□□□□ -0.78
SHROOM3-201ENST00000296043 TMEM106BQ9NUM4 274 aa10.21□□□□□ -0.78
SHROOM3-201ENST00000296043 MOB4Q9Y3A3 225 aa10.21□□□□□ -0.78
SHROOM3-201ENST00000296043 SSTR5P35346 364 aa10.21□□□□□ -0.78
SHROOM3-201ENST00000296043 TMEM101Q96IK0 257 aa10.21□□□□□ -0.78
SHROOM3-201ENST00000296043 AICDAQ9GZX7 198 aa10.21□□□□□ -0.78
SHROOM3-201ENST00000296043 TMEM222Q9H0R3 208 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms