RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 C11orf68Q9H3H3 251 aaKnown RBP13.93□□□□□ -0.18
SSRP1-202ENST00000293880 A0A1W2PPC1 479 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 K7N7A8 449 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 HPRT1P00492 218 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 TLNRD1Q9H1K6 362 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 DSPPQ9NZW4 1301 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 LY6EQ16553 131 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 TMEM78Q5T7P6 136 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 LINC00596Q86U02 117 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 CCL27Q9Y4X3 112 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 BCORQ6W2J9 1755 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 DOCK1Q14185 1865 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 STAG3L3P0CL85 134 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 RPL31P62899 125 aaKnown RBP13.92□□□□□ -0.18
SSRP1-202ENST00000293880 SSBP3Q9BWW4 388 aaPredicted RBP13.92□□□□□ -0.18
SSRP1-202ENST00000293880 TUBD1Q9UJT1 453 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 LOC101059948A0A1B0GTJ6 334 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 COX19Q49B96 90 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 C10orf35Q96D05 121 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 C18orf15Q96N68 181 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 OR2V2Q96R30 315 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.92□□□□□ -0.18
SSRP1-202ENST00000293880 FOLR2P14207 255 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 TTC3P53804 2025 aa13.92□□□□□ -0.18
SSRP1-202ENST00000293880 CDX1P47902 265 aaPredicted RBP13.91□□□□□ -0.18
SSRP1-202ENST00000293880 CX3CL1P78423 397 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 OR5A1Q8NGJ0 315 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 EGR1P18146 543 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 ANOS1P23352 680 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 ADAMTSL1Q8N6G6 1762 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 TRAV8-2A0A0B4J237 113 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 PGLYRP1O75594 196 aaPredicted RBP13.91□□□□□ -0.18
SSRP1-202ENST00000293880 SMAGPQ0VAQ4 97 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 KCNMB1Q16558 191 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 EBLN2Q6P2I7 272 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 SRSF12Q8WXF0 261 aaKnown RBP13.91□□□□□ -0.18
SSRP1-202ENST00000293880 GPR146Q96CH1 333 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 DPH3Q96FX2 82 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 NPFFR1Q9GZQ6 430 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 TMEM229AB2RXF0 380 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 ZG16O60844 167 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 DNAL4O96015 105 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 SPCS1Q9Y6A9 102 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 S4R3C0 116 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 KNL1Q8NG31 2342 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 NUP205Q92621 2012 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 PPIAL4EA0A075B759 164 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 FAM181BA6NEQ2 426 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 PPIAL4DF5H284 164 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 SS18L1O75177 396 aaPredicted RBP13.91□□□□□ -0.18
SSRP1-202ENST00000293880 PPIAL4FP0DN26 164 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 GZMMP51124 257 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 GGTLC2Q14390 218 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 PPIAL4AQ9Y536 164 aa13.91□□□□□ -0.18
SSRP1-202ENST00000293880 SPAARA0A1B0GVQ0 90 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 HAX1O00165 279 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 CRYBB3P26998 211 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 PMS2CLQ68D20 193 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 SYT8Q8NBV8 401 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 NPVFQ9HCQ7 196 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 FAM206AQ9NX38 181 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 ZNFX1Q9P2E3 1918 aaKnown RBP13.9□□□□□ -0.18
SSRP1-202ENST00000293880 FTH1P19P0C7X4 201 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 Q5BKY6 102 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 MBNL2Q5VZF2 373 aaKnown RBP13.9□□□□□ -0.18
SSRP1-202ENST00000293880 HLA-DRB1P01911 266 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 GDF9O60383 454 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 ZNF831Q5JPB2 1677 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 IGHV4-39P01824 125 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 PF4V1P10720 104 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 OR4A5Q8NH83 315 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 HEXA-AS1Q9H8Q6 139 aa13.9□□□□□ -0.18
SSRP1-202ENST00000293880 NMBP08949 121 aa13.89□□□□□ -0.19
SSRP1-202ENST00000293880 NFAM1Q8NET5 270 aaPredicted RBP13.89□□□□□ -0.19
SSRP1-202ENST00000293880 A1L4Q6 167 aa13.89□□□□□ -0.19
SSRP1-202ENST00000293880 H0Y980 276 aa13.89□□□□□ -0.19
SSRP1-202ENST00000293880 CCL21O00585 134 aa13.89□□□□□ -0.19
SSRP1-202ENST00000293880 PTP4A3O75365 173 aa13.89□□□□□ -0.19
SSRP1-202ENST00000293880 APOMO95445 188 aa13.89□□□□□ -0.19
SSRP1-202ENST00000293880 MAP1LC3AQ9H492 121 aa13.89□□□□□ -0.19
SSRP1-202ENST00000293880 P2RY4P51582 365 aa13.89□□□□□ -0.19
SSRP1-202ENST00000293880 DLL1O00548 723 aa13.89□□□□□ -0.19
SSRP1-202ENST00000293880 HOXC4P09017 264 aaPredicted RBP13.89□□□□□ -0.19
SSRP1-202ENST00000293880 KCNS1Q96KK3 526 aa13.89□□□□□ -0.19
SSRP1-202ENST00000293880 C1RLQ9NZP8 487 aa13.89□□□□□ -0.19
SSRP1-202ENST00000293880 H3BUT2 72 aa13.89□□□□□ -0.19
SSRP1-202ENST00000293880 TMEM252Q8N6L7 170 aa13.89□□□□□ -0.19
SSRP1-202ENST00000293880 OR4D5Q8NGN0 318 aa13.89□□□□□ -0.19
SSRP1-202ENST00000293880 SPSB2Q99619 263 aa13.89□□□□□ -0.19
SSRP1-202ENST00000293880 IGHV3-35A0A0C4DH35 117 aa13.88□□□□□ -0.19
SSRP1-202ENST00000293880 PRB4P10163 310 aaPredicted RBP13.88□□□□□ -0.19
SSRP1-202ENST00000293880 ZNF56Q15929 161 aa13.88□□□□□ -0.19
SSRP1-202ENST00000293880 CEACAM21Q3KPI0 293 aa13.88□□□□□ -0.19
SSRP1-202ENST00000293880 QTRT1Q9BXR0 403 aaKnown RBP13.88□□□□□ -0.19
SSRP1-202ENST00000293880 PHLDA3Q9Y5J5 127 aa13.88□□□□□ -0.19
SSRP1-202ENST00000293880 FBXW9Q5XUX1 488 aa13.88□□□□□ -0.19
SSRP1-202ENST00000293880 CHODLQ9H9P2 273 aa13.88□□□□□ -0.19
SSRP1-202ENST00000293880 S1PR2O95136 353 aa13.88□□□□□ -0.19
SSRP1-202ENST00000293880 GPR82Q96P67 336 aa13.88□□□□□ -0.19
SSRP1-202ENST00000293880 ZNF430Q9H8G1 570 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms