RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 OR1L8Q8NGR8 309 aa13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 OPN3Q9H1Y3 402 aaPredicted RBP13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 RNF222A6NCQ9 220 aa13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 RPS11P62280 158 aaKnown RBP eCLIP13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 SNRNP40Q96DI7 357 aaKnown RBP13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 CARHSP1Q9Y2V2 147 aaKnown RBP13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 H7C2G1 150 aa13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 AICDAQ9GZX7 198 aa13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 M0QZ24 198 aa13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 IGHV3-48P01763 117 aa13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 MYOZ3Q8TDC0 251 aa13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 RBM14Q96PK6 669 aaKnown RBP13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 NEU1Q99519 415 aa13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 SLC25A10Q9UBX3 287 aaPredicted RBP13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 GREB1LQ9C091 1923 aaPredicted RBP13.17□□□□□ -0.3
SHROOM4-201ENST00000289292 REG1AP05451 166 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 NUBP1P53384 320 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 CRYBB3P26998 211 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 TNFRSF9Q07011 255 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 CTHRC1Q96CG8 243 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 PRF1P14222 555 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 WNT10AQ9GZT5 417 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 CGB1A6NKQ9 187 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 C5orf67F2Z3F1 127 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 CRXO43186 299 aaPredicted RBP13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 BTF3P20290 206 aaKnown RBP13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 UCP2P55851 309 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 WFDC3Q8IUB2 231 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 RTBDNQ9BSG5 229 aaPredicted RBP13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 M0R296 226 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 RAMP1O60894 148 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 GLRX5Q86SX6 157 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 OR10S1Q8NGN2 331 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 PSME4Q14997 1843 aa13.16□□□□□ -0.3
SHROOM4-201ENST00000289292 LINC00869P0C866 280 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 FABP2P12104 132 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 CBLN1P23435 193 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 QTRT1Q9BXR0 403 aaKnown RBP13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 CRISPLD2Q9H0B8 497 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 THYN1Q9P016 225 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 PATJQ8NI35 1801 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 TRIP6Q15654 476 aaKnown RBP13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 ECSCRQ19T08 205 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 ABHD12Q8N2K0 398 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 SSBP3Q9BWW4 388 aaPredicted RBP13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 GCSHP23434 173 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 LGALS7P47929 136 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 CCL8P80075 99 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 SFRP2Q96HF1 295 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 P2RX4Q99571 388 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 BIVMQ86UB2 503 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 OR2V2Q96R30 315 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 GLRX2Q9NS18 164 aa13.15□□□□□ -0.3
SHROOM4-201ENST00000289292 Q8WTZ3 238 aa13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 SLC25A28Q96A46 364 aa13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 IMMP2LQ96T52 175 aa13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 IGHMP01871 453 aa13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 OR8B2Q96RD0 313 aa13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 CHD5Q8TDI0 1954 aa13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 TBX6O95947 436 aaPredicted RBP13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 LOC107984156A0A0G2JMH3 177 aa13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 ARL17AQ8IVW1 177 aa13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 ST6GALNAC6Q969X2 333 aa13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 TMUB1Q9BVT8 246 aa13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 PGPA6NDG6 321 aa13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 HERVK_113P61574 105 aa13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 DCAF10Q5QP82 559 aa13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 C1orf53Q5VUE5 145 aa13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 INO80CQ6PI98 192 aaPredicted RBP13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 OR8G5Q8NG78 346 aa13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 APOBEC4Q8WW27 367 aaKnown RBP13.14□□□□□ -0.31
SHROOM4-201ENST00000289292 ERVFRD-1P60508 538 aa13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 HOXA4Q00056 320 aaPredicted RBP13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 C14orf144Q96I85 54 aa13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 PMCHL1Q16048 86 aa13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 GMPPAQ96IJ6 420 aaPredicted RBP13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 WDR54Q9H977 334 aa13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 CA11O75493 328 aa13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 LEPROTL1O95214 131 aa13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 SPTBP11277 2137 aa13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 CEACAM3P40198 252 aa13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 WNT5BQ9H1J7 359 aa13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 TGFBR3LH3BV60 316 aa13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 HYPMO75409 117 aa13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 RPL31P62899 125 aaKnown RBP13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 NFAM1Q8NET5 270 aaPredicted RBP13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 MYOFQ9NZM1 2061 aa13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 K7N7A8 449 aa13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 TFF3Q07654 80 aa13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 MMDQ15546 238 aa13.13□□□□□ -0.31
SHROOM4-201ENST00000289292 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.12□□□□□ -0.31
SHROOM4-201ENST00000289292 TMEM189A5PLL7 270 aa13.12□□□□□ -0.31
SHROOM4-201ENST00000289292 SNCGO76070 127 aa13.12□□□□□ -0.31
SHROOM4-201ENST00000289292 KBTBD11O94819 623 aa13.12□□□□□ -0.31
SHROOM4-201ENST00000289292 STAG3L2P0CL84 134 aa13.12□□□□□ -0.31
SHROOM4-201ENST00000289292 SLC25A34Q6PIV7 304 aa13.12□□□□□ -0.31
SHROOM4-201ENST00000289292 SCN8AQ9UQD0 1980 aa13.12□□□□□ -0.31
SHROOM4-201ENST00000289292 SLC17A3O00476 420 aa13.12□□□□□ -0.31
SHROOM4-201ENST00000289292 C12orf54Q6X4T0 127 aa13.12□□□□□ -0.31
SHROOM4-201ENST00000289292 ZNF502Q8TBZ5 544 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms